Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD7
Confidence96.61%DateThu Jan 5 11:28:50 GMT 2012
Rank318Aligned Residues108
% Identity20%Templatec2qagB_
PDB info PDB header:cell cycle, structural proteinChain: B: PDB Molecule:septin-6; PDBTitle: crystal structure of human septin trimer 2/6/7
Resolution4.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130.........140.........150.........160.........170.........180..
Predicted Secondary structure 
























Query SS confidence 















































































Query Sequence  VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLK
Query Conservation 




  
 




 



     
 

 
 

 


 
 

 



  
   


        

  
   

  

  
Alig confidence 




































........................................


Template Conservation 
 


  
 






 
 
           
 
   ........................................   
Template Sequence  ILCVGETGLGKSTLMDTLFNTKFTQPGVQLQSNTYDL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . QEV
Template Known Secondary structure 
STTSSSTS



SS
........................................

Template Predicted Secondary structure 


















........................................
Template SS confidence 















































































   45....50.........60.........70.........80. ...
 
   183......190.........200....... ..210.........220.........230.........240....
Predicted Secondary structure 










..................













Query SS confidence 
























. . . . . . . . . . . . . . . . . .




































Query Sequence  FYDVLLVDTAGRLHVDEAMMDEIKQ. . . . . . . . . . . . . . . . . . VHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTG
Query Conservation    









   
  

 

  ..................
     
 
 





  

 
   
  
       
Alig confidence 
























..................



































.
Template Conservation     
 





            
   
       
             
   
  
       

     
     

.
Template Sequence  RLKLTIVSTVGFGDINKEDSYKPIVEFIDAQFEAYLQEEIRRVLHTYHDIHVCLYFIAPTGKSLDLVTMKKLDSKVNII.
Template Known Secondary structure 





S







S








T
S
S.
Template Predicted Secondary structure 



















.
Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.........170..
 
   245....250.
Predicted Secondary structure 


Query SS confidence 






Query Sequence  VVLTKVD
Query Conservation 






Alig confidence 






Template Conservation   



 
Template Sequence  PIIAKAD
Template Known Secondary structure  S
GG
Template Predicted Secondary structure 
Template SS confidence 






   181......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions