Job Description P0AGD7 Confidence 98.45% Date Thu Jan 5 11:28:50 GMT 2012 Rank 64 Aligned Residues 169 % Identity 21% Template c2ph1A_ PDB info PDB header:ligand binding protein Chain: A: PDB Molecule:nucleotide-binding protein; PDBTitle: crystal structure of nucleotide-binding protein af2382 from2 archaeoglobus fulgidus, northeast structural genomics target gr165 Resolution 2.70 Å

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		97	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure												.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	Q	P	P	A	V	V	L	M	A	.	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation												.																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																						.												.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.												.
Template Sequence		G	K	I	K	S	R	I	A	V	X	S	G	K	G	G	V	G	K	S	T	V	T	A	L	L	A	V	H	Y	A	R	Q	.	G	K	K	V	G	I	L	D	A	D	F	.	L	G	P	S	I	P	I	L	F	G	L	R	N	A	R	I	A	V	S	A	E	G	L	E	P	V	L	T	Q	K	Y	G	I	K	V
Template Known Secondary structure		T	T		S								S	S	S		T	T															T	.	T										S	.	S								T	T			S							T	T								T	T	T
Template Predicted Secondary structure																																		.												.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
										156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																																																								.
Query SS confidence		.	.	.	.	.	.	.	.																																																																								.
Query Sequence		.	.	.	.	.	.	.	.	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	.
Query Conservation		.	.	.	.	.	.	.	.																																																																								.
Alig confidence		.	.	.	.	.	.	.	.																																											.	.	.	.	.	.																								.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		X	S	X	Q	F	L	L	P	K	E	N	T	P	V	I	W	R	G	P	L	I	A	G	X	I	R	E	F	L	G	R	V	A	W	G	E	L	D	H	L	L	I	D	L	P	P	G	T	G	D	.	.	.	.	.	.	A	P	L	T	V	X	Q	D	A	K	P	T	G	V	V	V	V	S	T	P	Q	E	L	T
Template Known Secondary structure				G	G	G	G	S	T	T		S	S						S													S	B				S		S								S	S	S	S	S	.	.	.	.	.	.												S								S	S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.							.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.									.	.	250	.	.	.	.	.	.	.			.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																			.	.					.	.	.	.	.	.	.	.											.	.
Query SS confidence																			.	.					.	.	.	.	.	.	.	.											.	.
Query Sequence		Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	.	.	G	V	V	L	.	.	.	.	.	.	.	.	T	K	V	D	G	D	A	R	G	G	.	.	A	A	L	S	I	R	H	I	T	G	K	P	I	K	F	L
Query Conservation																			.	.					.	.	.	.	.	.	.	.											.	.
Alig confidence																			.	.					.	.	.	.	.	.	.	.											.	.
Template Conservation
Template Sequence		A	V	I	V	E	K	A	I	N	X	A	E	E	T	N	T	S	V	L	G	L	V	E	N	X	S	Y	F	V	C	P	N	C	G	H	K	S	Y	I	F	G	E	G	K	G	E	S	L	A	K	K	Y	N	I	G	F	F	T	S
Template Known Secondary structure														T	T	T									T	T						T	T	T						T	T												T	T		S
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions