Job Description P0AGD7 Confidence 96.51% Date Thu Jan 5 11:28:50 GMT 2012 Rank 337 Aligned Residues 122 % Identity 16% Template c2pbrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase (aq_969) from aquifex aeolicus2 vf5 Resolution 1.96 Å

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		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L
Query Conservation
Alig confidence																												.
Template Conservation																												.
Template Sequence		L	I	A	F	E	G	I	D	G	S	G	K	T	T	Q	A	K	K	L	Y	E	Y	L	K	Q	K	.	G	Y	F	V	S	L	Y	R	E	P	G	G	T	K	V	G	E	V	L	R	E	I	L	L	T	E	E	L	D	E	R	T	E	L	L	L	F	E	A	S	R	S	K	L	I	E	E	K	I	I	P	D	L
Template Known Secondary structure									T	T	S																T	.	T								S	S		S	S													S																						T
Template Predicted Secondary structure																												.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		182	.	.	.	.	.	.	.	190	.										.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.
Query Sequence		K	F	Y	D	V	L	L	V	D	T	.	.	.	.	.	.	.	.	.	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M
Query Conservation												.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	D	K	V	V	I	L	D	R	F	V	L	S	T	I	A	Y	Q	G	Y	G	K	G	L	D	V	E	F	I	K	N	L	N	E	F	A	T	R	G	V	K	P	D	I	T	L	L	L	D	I	P
Template Known Secondary structure			T	T							S										T	T	T	T																T	T				S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions