Job Description P0AGD7 Confidence 98.58% Date Thu Jan 5 11:28:50 GMT 2012 Rank 54 Aligned Residues 161 % Identity 20% Template c2ozeA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:orf delta'; PDBTitle: the crystal structure of delta protein of psm19035 from2 streptoccocus pyogenes Resolution 1.83 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																																				.
Query SS confidence																																				.
Query Sequence		V	K	I	V	R	N	E	L	V	A	A	M	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	.	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E
Query Conservation																																				.
Alig confidence														.	.	.	.	.	.	.	.															.																				.																		.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																																			.																		.	.	.	.	.	.	.	.
Template Sequence		E	L	K	I	L	E	E	L	R	R	I	L	.	.	.	.	.	.	.	.	S	N	K	N	E	A	I	V	I	L	N	N	Y	F	K	G	G	V	G	K	S	K	L	S	T	M	F	A	Y	L	T	D	K	L	.	N	L	K	V	L	M	I	D	K	D	L	Q	A	T	L	T	K	.	.	.	.	.	.	.	.
Template Known Secondary structure														.	.	.	.	.	.	.	.					S									S	S	S	S	S	S															T	.	T										T	T						.	.	.	.	.	.	.	.
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																																			.																		.	.	.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30									.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																																												.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	A	K	T	F	K	V	E	L	P	R	V	N	F	Y	E	G	L	K	N	G	N	L	A	S	S	I	V	H	L	T	D	N	L	D	L	I	P	G	T	F	D	L	M	L	L	P	K	L	T	R	S	W	T	F	E	N	E	S	R	L	L	A	T	L	L	A	P	L	K	S	D	Y	D	L	I	I	I	D
Template Known Secondary structure				T	T	T	S						S	S									T			G	G	G				S	S	S	S								G	G	G	G	G					T	T	T	S							T							G	G	G	G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.	240	.	.					.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																																							.	.	.	.	.																.	.	.	.
Query SS confidence																																							.	.	.	.	.																.	.	.	.
Query Sequence		T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	Q	.	.	.	.	.	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	.	.	.	.	T	G	V	V	L	T	K	V	D	G	D	A	R	G	G	A	A	L
Query Conservation																																							.	.	.	.	.																.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.															.	.	.	.	.																.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.
Template Sequence		T	V	P	T	P	S	V	Y	T	N	N	A	I	V	A	.	.	.	.	.	.	.	.	S	D	Y	V	M	I	P	L	Q	A	E	E	E	S	T	N	N	I	Q	N	Y	I	S	Y	L	I	D	L	Q	E	Q	F	N	P	G	L	D	M	I	G	F	V	P	Y	L	V	D	T	D	S	A	T	I	K	S	N
Template Known Secondary structure				S	S		S										.	.	.	.	.	.	.	.		S								G	G	G																						T	T											S		T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.									.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions