Job Description P0AGD7 Confidence 99.97% Date Thu Jan 5 11:28:50 GMT 2012 Rank 22 Aligned Residues 113 % Identity 37% Template c2jqeA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:signal recognition 54 kda protein; PDBTitle: soution structure of af54 m-domain Resolution UNK

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		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		L	K	K	G	D	G	F	D	L	N	D	F	L	E	Q	L	R	Q	M	K	N	M	G	G	M	A	S	L	M	G	K	L	P	G	M	.	G	Q	I	P	D	N	V	K	S	Q	M	D	D	K	V	L	V	R	M	E	A	I	I	N	S	M	T	M	K	E	R	A	K	P	E	I	I	K	G	S	R	K	R	R
Query Conservation																																					.
Alig confidence							.																														.
Template Conservation							.
Template Sequence		M	E	K	G	T	.	F	T	L	K	D	I	Y	K	Q	I	E	A	M	N	K	M	G	P	V	R	K	I	F	E	M	L	P	F	G	L	G	L	K	V	D	N	D	V	M	E	M	T	Q	E	K	M	K	K	F	R	V	I	M	D	S	M	T	E	E	E	L	L	N	P	K	I	I	D	S	S	R	I	R	R
Template Known Secondary structure						S	.	S		T								T	T								S		S	S					S				S	S					S	S																	S								G	G	G
Template Predicted Secondary structure							.
Template SS confidence
		311	.	.	.	.		.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	G	C	G	M	Q	V	Q	D	V	N	R	L	L	K	Q	F	D	D	M	Q	R	M	M	K	K	M	K	K	G	G	M	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	I	G	S	G	T	S	P	Q	E	V	K	E	L	L	N	Y	Y	K	T	M	K	N	L	M	K	K	M	K	K	N	K	L	P
Template Known Secondary structure							T	S																			T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions