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Job DescriptionP0AGD7
Confidence97.39%DateThu Jan 5 11:28:50 GMT 2012
Rank195Aligned Residues123
% Identity15%Templatec2jlrA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:serine protease subunit ns3; PDBTitle: dengue virus 4 ns3 helicase in complex with amppnp
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150.........160.......
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Query Sequence  QPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQK. . . . . . . . . .
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Template Sequence  RKKRLTIMDLHPGAGKTKRILPSIVREALKRRLRTLILA. . PTRVVAAEMEEALR. GLPIRYQTPAVKSDHTGREIVDLM
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   184.....190.........200.........210.........220.. .......230...... ...240.........250.........260
 
   168.170.........180.........190.........200.........210.........220....
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Query Sequence  . PVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAM
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Template Sequence  CHATFTTRLLSSTRVPNYNLIVMDEAH. FTDPCSVAARGYISTRVEMGEAAAIFMTAT
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   261........270.........280....... ..290.........300.........310.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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