Job Description P0AGD7 Confidence 97.07% Date Thu Jan 5 11:28:50 GMT 2012 Rank 248 Aligned Residues 182 % Identity 26% Template c2j69D_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:bacterial dynamin-like protein; PDBTitle: bacterial dynamin-like protein bdlp Resolution 3.0 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	E	D	N	V	K	D	T	L	R	E	V	R	M	A	L	L	E	A	D	V	A	L	P	V	V	R	E	F	I	N	R	V	K	E	K	A	V	G	H	E	V	N	K	S	L	T	P	G	Q	E	F	V	K	I	V	R	N	E	L	V	A	A	M	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	T	D	R	F	I	Q	D	L	E	R	V	A	Q	V	R	S	E	M	S	V	C	L	N	K	L	A	E	T	I	N	K	A	E	L	A	G	D	S	S	S	G	K	L	S	L	E	R	D	I	E	D	I	T	I	A	S	K	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	G	V	F
Template Known Secondary structure																																						T	T	T	T	T	T				S																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.															.	.	.	.	70
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	L	V	L	G	D	M	K	R	G	K	S	T	F	L	N	A	L	I	.	.	.	.	.	.	.	G	E	N	L	L	P	S	D	V	N	P	C	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	V	L	T	V	L	R	Y	G	P	E	K	K	V	T	I	H	F	N	D	G	K	S	P	Q	Q
Template Known Secondary structure									T	T	S											.	.	.	.	.	.	.	T	S	S		S					S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S								S	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90								.	.	.	.	.	.	.	.	.	100	.	.	.															.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.
																																								168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.										.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence		L	D	F	Q	N	F	K	Y	K	Y	T	I	D	P	A	E	A	K	K	L	E	Q	E	K	K	Q	A	F	P	D	V	D	Y	A	V	V	E	Y	P	L	T	L	L	Q	K	.	.	.	.	.	.	.	.	.	.	G	I	E	I	V	D	S	P	G	.	.	.	L	N	D	T	E	A	R	N	E	L	S	L	G
Template Known Secondary structure											S												T	S	S			S		T	T															T	.	.	.	.	.	.	.	.	.	.	T									.	.	.						T						T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.											.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.		.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure																			.	.											.
Query SS confidence																			.	.											.
Query Sequence		A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	.	.	Q	D	A	A	N	T	A	K	A	F	.	N	E	A	L	P	L	T	G	V	V	L	T	K	V	D
Query Conservation																			.	.											.
Alig confidence																			.	.											.
Template Conservation
Template Sequence		Y	V	N	N	C	H	A	I	L	F	V	M	R	A	S	Q	P	C	T	L	G	E	R	R	Y	L	E	N	Y	I	K	G	R	G	L	T	V	F	F	L	V	N	A	W	D
Template Known Secondary structure					S	S	S								T	T	S		S												T	T	T	S											G	G
Template Predicted Secondary structure
Template SS confidence
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions