Job Description P0AGD7 Confidence 98.01% Date Thu Jan 5 11:28:50 GMT 2012 Rank 94 Aligned Residues 141 % Identity 23% Template c2j3eA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:t7i23.11 protein; PDBTitle: dimerization is important for the gtpase activity of2 chloroplast translocon components attoc33 and pstoc159 Resolution 3.2 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	E	F	V	K	I	V	R	N	E	L	V	A	A	M	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L
Query Conservation
Alig confidence																		.	.	.	.																															.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.																															.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	Q	F	P	A	A	T	Q	E	K	L	I	E	F	F	G	.	.	.	.	K	L	K	Q	K	D	M	N	S	M	T	V	L	V	L	G	K	G	G	V	G	K	S	S	T	V	N	S	L	I	.	.	.	.	.	.	.	G	E	Q	V	V	R	V	S	P	F	Q	A	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				S														.	.	.	.					T	T											S	T	T	S	S										.	.	.	.	.	.	.	S	S	S		S				S			S	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																		.	.	.	.																															.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.					.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.				.
Predicted Secondary structure																																													.	.	.																															.	.	.
Query SS confidence																																													.	.	.																															.	.	.
Query Sequence		A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	.	.	.	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	.	.	.	T
Query Conservation																																													.	.	.																															.	.	.
Alig confidence		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.																															.	.	.
Template Conservation		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	E	G	L	R	P	V	M	V	S	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	G	G	F	T	I	N	I	I	D	T	P	G	L	V	E	A	G	Y	V	N	H	Q	A	L	E	L	I	K	G	F	L	V	N	R	T	I	D	V	L	L	Y	V	D	R	L	D	V	Y	A	V
Template Known Secondary structure		.	.				S								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											S	B		S	S	S	B												T	S	S			B									T	T
Template Predicted Secondary structure		.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				70	.	.	.	.	.	.	.	.	.	80																	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.						.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		G	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	.	.	.	.	.	L	T	G	V	V	L	T	K	V	D	G
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		D	E	L	D	K	Q	V	V	I	A	I	T	Q	T	F	G	K	E	I	W	C	K	T	L	L	V	L	T	H	A	Q	F
Template Known Secondary structure			T													S							T								T	T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions