Job Description P0AGD7 Confidence 98.59% Date Thu Jan 5 11:28:50 GMT 2012 Rank 53 Aligned Residues 174 % Identity 21% Template c2hf9A_ PDB info PDB header:hydrolase, metal binding protein Chain: A: PDB Molecule:probable hydrogenase nickel incorporation PDBTitle: crystal structure of hypb from methanocaldococcus2 jannaschii in the triphosphate form Resolution 1.90 Å

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		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A
Query Conservation
Alig confidence																																	.	.																													.
Template Conservation																																	.	.																													.
Template Sequence		L	N	K	H	G	V	V	A	F	D	F	M	G	A	I	G	S	G	K	T	L	L	I	E	K	L	I	D	N	L	K	.	.	D	K	Y	K	I	A	C	I	A	G	D	V	I	A	K	F	D	A	E	R	M	E	K	H	G	A	K	V	.	V	P	L	N	T	G	K	E	C	H	L	D	A	H	L	V	G	H
Template Known Secondary structure					T	T									S	T	T	S	S													T	.	.	T	T										T	T	T									T	T	T				.						T	T		S	S
Template Predicted Secondary structure																																	.	.																													.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G	V	V	L	T	K	V	D	G	D	A
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.																																	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.																																	.	.
Template Sequence		A	L	E	D	L	N	L	D	E	I	D	L	L	F	I	E	N	V	G	N	L	I	C	P	A	D	F	.	.	.	.	.	.	.	.	.	D	L	G	T	H	K	R	I	V	V	I	S	T	T	E	G	D	D	T	I	E	K	H	P	G	I	M	K	T	A	D	L	.	.	I	V	I	N	K	I	D	L	A	D
Template Known Secondary structure				T	T	S		G	G	G		S								S		S	S	G	G	G	G		.	.	.	.	.	.	.	.	.			S		S								G	G	G		T	T	T	T	T	T						T	T		S		.	.						G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.																																	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.										.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.							.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.
Predicted Secondary structure														.	.	.	.	.	.									.	.
Query SS confidence														.	.	.	.	.	.									.	.
Query Sequence		R	G	G	A	A	L	S	I	R	H	I	T	.	.	.	.	.	.	G	K	P	I	K	F	L	G	.	.	V	G	E	K	T	E	A	L
Query Conservation														.	.	.	.	.	.									.	.
Alig confidence														.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		A	V	G	A	D	I	K	K	M	E	N	D	A	K	R	I	N	P	D	A	E	V	V	L	L	S	L	K	T	M	E	G	F	D	K	V
Template Known Secondary structure				T															T	T	S							T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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