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Job DescriptionP0AGD7
Confidence96.67%DateThu Jan 5 11:28:50 GMT 2012
Rank308Aligned Residues98
% Identity20%Templatec2elfA_
PDB info PDB header:translationChain: A: PDB Molecule:protein translation elongation factor 1a; PDBTitle: crystal structure of the selb-like elongation factor ef-pyl2 from methanosarcina mazei
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLK
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Template Sequence  VAIIGTEKSGRTSLAANL. . . . . . . . . . . . . . . . . . . . . . . . . . . . GKKGTSSDITXYNNDK. . . . . . . . . . . . . . . . . E
Template Known Secondary structure  STTSSTT............................SSSS
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   4.....10.........20. ........30....... .
 
   183......190.........200.........210.........220.........230.........240.... .....250.
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Query Sequence  FYDVLLVDTAGRLHVDEAMMDEIKQVHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTG. . VVLTKVD
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Template Sequence  GRNXVFVDAHSYPKTLKSLITALNI. . . . . . SDIAVLCIPPQGLDAHTGECIIALDLLGFKHGIIALTRSD
Template Known Secondary structure  SS
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   3940.........50.........60... ......70.........80.........90.........100...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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