Job Description P0AGD7 Confidence 95.41% Date Thu Jan 5 11:28:50 GMT 2012 Rank 465 Aligned Residues 135 % Identity 20% Template c2dykB_ PDB info PDB header:ribosome Chain: B: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of n-terminal gtp-binding domain of enga from2 thermus thermophilus hb8 Resolution 1.96 Å

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		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K
Query Conservation
Alig confidence																							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	K	V	V	I	V	G	R	P	N	V	G	K	S	S	L	F	N	R	L	L	.	.	.	.	.	.	.	K	K	R	S	D	L	K	E	G	V	V	E	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										T	T	S	S										.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.								.	.	.	.	.	.	.	30	.	.	.	.	.
		181	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		L	K	F	Y	D	V	L	L	V	D	T	A	G	.	.	.	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G	V	V	L	T	K	V	D	G	D	A	R	G	G
Query Conservation															.	.	.
Alig confidence		.													.	.	.
Template Conservation		.
Template Sequence		.	D	R	G	R	F	L	L	V	D	T	G	G	L	W	S	G	D	K	W	E	K	K	I	Q	E	K	V	D	R	A	L	E	D	A	E	V	V	L	F	A	V	D	G	R	A	E	L	T	Q	A	D	Y	E	V	A	E	Y	L	R	R	K	G	K	P	V	I	L	V	A	T	K	V	D	D	P	K	H	E	L
Template Known Secondary structure		.	T	T									G	G	G		S	S	S	S													T	T	T		S								S	S	S																	T												S	G	G	G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.
Predicted Secondary structure																			.	.
Query SS confidence																			.	.
Query Sequence		A	A	L	S	I	R	H	I	T	G	K	P	I	K	F	L	G	.	.	V	G	E	K	T	E	A	L
Query Conservation																			.	.
Alig confidence																			.	.
Template Conservation
Template Sequence		Y	L	G	P	L	Y	G	L	G	F	G	D	P	I	P	T	S	S	E	H	A	R	G	L	E	E	L
Template Known Secondary structure		G		G	G	G	G	G	S	S	S		S					B	T	T	T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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