Job Description P0AGD7 Confidence 95.67% Date Thu Jan 5 11:28:50 GMT 2012 Rank 438 Aligned Residues 115 % Identity 23% Template c2b92A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:interferon-induced guanylate-binding protein 1; PDBTitle: crystal-structure of the n-terminal large gtpase domain of human2 guanylate binding protein 1 (hgbp1) in complex with gdp/alf3 Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V
Query Conservation
Alig confidence																															.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template Sequence		L	S	A	I	T	Q	P	M	V	V	V	A	I	V	G	L	Y	R	T	G	K	S	Y	L	M	N	K	L	A	.	.	.	.	.	.	.	G	K	K	K	G	F	S	L	G	S	T	V	Q	S	H	.	.	.	.	.	.	.	.	.	.	T	K	G	I	W	M	W	C	V	P	H	P	K	K	.	.	.	.	.
Template Known Secondary structure			T	T			S	B									B	S	S	S	S									T	.	.	.	.	.	.	.	T		S	S	S	S					S	S	S			.	.	.	.	.	.	.	.	.	.			S									S	S	S	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.															.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.								60	.	.	.	.	.	.	.	.	.	70	.	.	.	.											.	.	.	.	.	80	.	.	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	.	.	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	Q	D	A	A	N	T	A	K	A	F	N	E
Query Conservation																												.	.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.
Template Conservation		.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	P	G	H	I	L	V	L	L	D	T	E	G	L	G	D	V	E	K	G	D	N	Q	N	D	S	W	I	F	A	L	A	V	L	L	S	S	T	F	V	Y	N	S	I	G	T	I	N	Q	Q	A	M	D	Q	L	Y	Y	V	T	E
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	T	T											B	T		T	T	T																		S								S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Template SS confidence
											89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions