Job Description P0AGD7 Confidence 95.82% Date Thu Jan 5 11:28:50 GMT 2012 Rank 423 Aligned Residues 113 % Identity 19% Template c2b8tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from u.urealyticum in2 complex with thymidine Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.			.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	.	.	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E
Query Conservation																																						.	.
Alig confidence																													.									.	.									.	.	.	.	.	.									.
Template Conservation																													.																			.	.	.	.	.	.									.
Template Sequence		W	I	E	F	I	T	G	P	M	F	A	G	K	T	A	E	L	I	R	R	L	H	R	L	E	Y	A	.	D	V	K	Y	L	V	F	K	P	K	I	D	T	R	S	I	R	N	.	.	.	.	.	.	I	Q	S	R	T	G	T	S	.	L	P	S	V	E	V	E	S	A	P	E	I	L	N	Y	I	M	S	N
Template Known Secondary structure									S	T	T	S																T	.	T												G	G	G		S	S	.	.	.	.	.	.								S	.	S						S	S	T									S	T
Template Predicted Secondary structure																													.																			.	.	.	.	.	.									.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.							.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M
Query Conservation
Alig confidence																				.	.	.
Template Conservation																				.	.	.
Template Sequence		S	F	N	D	E	T	K	V	I	G	I	D	E	V	Q	F	F	D	.	.	.	D	R	I	C	E	V	A	N	I	L	A	E	N	G	F	V	V	I	I	S	G	L	D	K	N
Template Known Secondary structure		T	S		T	T								S	G	G	G	S		.	.	.	T												T	T									S	B
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions