Job Description P0AGD7 Confidence 100.00% Date Thu Jan 5 11:28:50 GMT 2012 Rank 13 Aligned Residues 286 % Identity 30% Template c1zu4A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:ftsy; PDBTitle: crystal structure of ftsy from mycoplasma mycoides- space2 group p21212 Resolution 1.95 Å

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		1	.	.	.	.				.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.
Query SS confidence							.	.	.
Query Sequence		M	F	D	N	L	.	.	.	T	D	R	L	S	R	T	L	R	N	I	S	G	R	G	R	L	T	E	D	N	V	K	D	T	L	R	E	V	R	M	A	L	L	E	A	D	V	A	L	P	V	V	R	E	F	I	N	R	V	K	E	K	A	V	G	H	E	V	N	K	S	L	T	P	G	Q	E	F	V	K	I
Query Conservation							.	.	.
Alig confidence							.	.	.																				.	.	.																																						.	.	.	.	.	.
Template Conservation																													.	.	.																																						.	.	.	.	.	.
Template Sequence		M	E	K	A	M	L	K	S	A	F	N	F	S	K	D	I	K	K	L	S	K	K	Y	K	Q	A	D	.	.	.	D	E	F	F	E	E	L	E	D	V	L	I	Q	T	D	M	G	M	K	M	V	L	K	V	S	N	L	V	R	K	K	T	K	R	D	T	S	.	.	.	.	.	.	F	E	N	I	K	D	A
Template Known Secondary structure						T																	T					S	.	.	.														T	T																			T	T			.	.	.	.	.	.
Template Predicted Secondary structure																													.	.	.																																						.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.							.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		V	R	N	E	L	V	A	A	M	.	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G
Query Conservation											.
Alig confidence											.																																										.
Template Conservation																																																					.
Template Sequence		L	V	E	S	L	Y	Q	A	Y	T	D	N	D	W	Y	R	I	D	F	K	E	N	R	L	N	I	F	M	L	V	G	V	N	G	T	G	K	T	T	S	L	A	K	M	A	N	Y	Y	A	E	L	.	G	Y	K	V	L	I	A	A	A	D	T	F	R	A	G	A	T	Q	Q	L	E	E	W	I	K	T	R	L
Template Known Secondary structure													S									T	T	S								S	S	T	T	S	S															T	.	T											S													T	T	T	S
Template Predicted Secondary structure																																																					.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		157	.					.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.							.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.																																																								.	.	.	.	.	.
Query SS confidence				.	.	.	.																																																								.	.	.	.	.	.
Query Sequence		V	D	.	.	.	.	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	.	.	.	.	.	.	P	V	E	T	L	F	V	V	D	A	M	T	G
Query Conservation				.	.	.	.																																																								.	.	.	.	.	.
Alig confidence				.	.	.	.																																																								.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	K	V	D	L	V	K	A	N	K	L	N	A	D	P	A	S	V	V	F	D	A	I	K	K	A	K	E	Q	N	Y	D	L	L	L	I	D	T	A	G	R	L	Q	N	K	T	N	L	M	A	E	L	E	K	M	N	K	I	I	Q	Q	V	E	K	S	A	P	H	E	V	L	L	V	I	D	A	T	T	G
Template Known Secondary structure			T	T							S	S	T	T																	T	T		S										G	G	G																	T	T		T	T			S								G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G	V	V	L	T	K	V	D	G	D	A	R	G	G	A	A	L	S	I	R	H	I	T	G	K	P	I	K	F	L	G	V	G	E	K	T	E	A	L	E	P	F	H	P	D	R	I	A	S	R	I	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	N	G	V	I	Q	A	E	E	F	S	K	V	A	D	V	S	G	I	I	L	T	K	M	D	S	T	S	K	G	G	I	G	L	A	I	K	E	L	L	N	I	P	I	K	M	I	G	V	G	E	K	V	D	D	L	L	A	F	D	I	D	Q	Y	I	V	H	L	S	S
Template Known Secondary structure												T	T	T	S										G	G	G		S		T	T																			S	S	S	T	T															T	G
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions