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Job DescriptionP0AGD7
Confidence97.22%DateThu Jan 5 11:28:50 GMT 2012
Rank223Aligned Residues151
% Identity19%Templatec1wf3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:gtp-binding protein; PDBTitle: crystal structure of gtp-binding protein tt1341 from thermus2 thermophilus hb8
Resolution1.88 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   96...100.........110.........120.........130.........140.........150.........160.........170.....
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Query Sequence  AAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGVDFFPSDVGQKPVDIVNAA
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Template Sequence  EKTYSGFVAIVGKPNVGKSTLLNNLL. . . . . . . GVKVAPISPRPQ. . . . . . . . . . . . . TTRKRLRGILT. . . . . . . . . . .
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   3......10.........20........ .30.........40 .........50.
 
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Query Sequence  LKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQ. . VHASINPVETLFVVDAMTGQDAANTAKAFNEALPLTG. . . . VVLTK
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Template Sequence  . . . . . EGRRQIVFVDTPGLHKPMDALGEFMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARALKPLVGKVPILLVGNK
Template Known Secondary structure  .....TT







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   52.......60.........70.........80.........90.........100.........110.........120......
 
   250.........260.........270..... ....280..
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Query Sequence  VDGDARGGAALSIRHITGKPIKFLGV. . . . GEKTEAL
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Template Sequence  LDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAEL
Template Known Secondary structure  GGG
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TT
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   127..130.........140.........150.........160...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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