Job Description P0AGD7 Confidence 96.99% Date Thu Jan 5 11:28:50 GMT 2012 Rank 264 Aligned Residues 172 % Identity 13% Template c1t4gA_ PDB info PDB header:recombination Chain: A: PDB Molecule:dna repair and recombination protein rada; PDBTitle: atpase in complex with amp-pnp Resolution 2.00 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.						80	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.
Query Sequence		S	R	T	L	R	N	I	S	G	R	G	R	L	T	E	D	N	V	K	D	T	L	R	E	V	R	M	A	L	L	E	A	D	V	A	L	P	V	V	R	E	F	I	N	R	V	K	E	K	A	V	G	H	E	V	N	K	S	L	T	P	G	Q	E	F	V	K	I	V	R	.	.	.	.	.	N	E	L	V	A
Query Conservation																																																																								.	.	.	.	.
Alig confidence																										.	.																								.																					.	.	.	.	.
Template Conservation																										.	.																								.
Template Sequence		P	S	T	A	E	K	L	V	E	A	G	Y	I	D	F	M	K	I	A	T	A	T	V	G	.	.	E	L	T	D	I	E	G	I	S	E	K	A	A	A	K	M	I	M	G	A	R	D	L	.	C	D	L	G	F	K	S	G	I	D	L	L	K	Q	R	S	T	V	W	K	L	S	T	S	S	S	E	L	D	S
Template Known Secondary structure											T	T			S						T					.	.				T	T	S	S																	.	T	T		S				T								T	T							S
Template Predicted Secondary structure																										.	.																								.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.														.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	M	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.
Template Sequence		V	L	G	G	G	L	E	.	.	.	.	.	.	.	S	Q	S	V	T	E	F	A	G	V	F	G	S	G	K	T	Q	I	M	H	Q	S	C	V	N	L	Q	N	P	E	F	L	F	Y	D	E	E	A	V	S	K	G	E	V	A	Q	P	K	A	V	Y	I	D	T	E	G	T	F	R	P	E	R	I	M	Q	M
Template Known Secondary structure			T	T	T	S			.	.	.	.	.	.	.	B	T	S							S	T	T	S	S												T	T		G	G	G					T	T	T	S		G	G	G	G	S	S								S	S	S
Template Predicted Secondary structure									.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.								.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		152	.	.	.	.	.	.										.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.																									.
Query SS confidence									.	.	.	.	.	.	.	.	.																									.
Query Sequence		A	E	Q	V	G	V	D	.	.	.	.	.	.	.	.	.	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	.	F	Y	D	V	L	L	V	D	T
Query Conservation									.	.	.	.	.	.	.	.	.																									.
Alig confidence									.	.	.	.	.	.	.	.	.																									.
Template Conservation
Template Sequence		A	E	H	A	G	I	D	G	Q	T	V	L	D	N	T	F	V	A	R	A	Y	N	S	D	M	Q	M	L	F	A	E	K	I	E	D	L	I	Q	E	G	N	N	I	K	L	V	V	I	D	S
Template Known Secondary structure						T	S								T							S	S										T							T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions