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Job DescriptionP0AGD7
Confidence97.02%DateThu Jan 5 11:28:50 GMT 2012
Rank258Aligned Residues133
% Identity14%Templatec1sxjA_
PDB info PDB header:replicationChain: A: PDB Molecule:activator 1 95 kda subunit; PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution2.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   72.......80.........90.........100.........110.........120.........130.........140..... ....
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Query Sequence  QEFVKIVRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAI. . KQLE
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Template Sequence  MKLKNWLANWENSKKNSFKHAGKDGSGVFRAAMLYGPPGIGKTTAAHLVAQEL. . . . GYDILEQNASDVRSKTLLNAGVK
Template Known Secondary structure  TTTT



TTSTTS
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STTSST....T

TTS


TGG
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   318.320.........330.........340.........350.........360.........370 .........380.........390...
 
   150.........160.........170.........180.........190.. .......200.........210.........220..
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Query Sequence  TLAEQVGVDFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTA. GRLHVDEAMMDEIKQVHASINPVETLFVVD
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Template Sequence  NALDNMSVVGYFKHQNLN. . . . . . . . . . . . . . GKHFVIIMDEVDGMSGGDRGGVGQLAQFCRKTSTPLILICNE
Template Known Secondary structure  GGTT


STTTTT


SS..............TTS
SGGG

TTSTT
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   394.....400.........410. ........420.........430.........440.........450...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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