Job Description P0AGD7 Confidence 97.71% Date Thu Jan 5 11:28:50 GMT 2012 Rank 131 Aligned Residues 131 % Identity 21% Template c1skqB_ PDB info PDB header:translation Chain: B: PDB Molecule:elongation factor 1-alpha; PDBTitle: the crystal structure of sulfolobus solfataricus elongation2 factor 1-alpha in complex with magnesium and gdp Resolution 1.80 Å

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Sequence		K	P	H	L	N	L	I	V	I	G	H	V	D	H	G	K	S	T	L	V	G	R	L	L	M	D	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	F	I	D	E	K	T	V	K	E	A	E	E	A	A	K	K	L	G	K	E	.	.	.	.	S	E	K	F	A	F	L	L	D	R	L	K	E	E	M
Template Known Secondary structure												S	T	T	S	S												.	.	.	.	.	.	.	.	.	.	.	.	.		B				S	S												T	T		T	.	.	.	.	T												T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.														30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.											.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																			.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	.	.	.	.	.	.	.	.	.	.	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G	V	V	L
Query Conservation																																																			.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.									.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.									.	.
Template Sequence		R	F	E	T	K	K	Y	F	F	T	I	I	D	A	P	G	.	.	.	.	H	R	D	F	V	K	N	M	.	.	I	T	G	A	S	Q	A	D	A	A	I	L	V	V	S	A	K	K	G	E	Y	E	A	G	M	S	V	E	G	Q	T	R	E	H	I	I	L	A	K	T	M	G	L	D	Q	L	I	V	A	V
Template Known Secondary structure						S	S									T	T	.	.	.	.	S	T	T						.	.			S	S	S			S									S	T	T						S	S	S	S													T	T
Template Predicted Secondary structure																		.	.	.	.									.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		248	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	K	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	M	D
Template Known Secondary structure				G	G
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions