Job Description P0AGD7 Confidence 97.29% Date Thu Jan 5 11:28:50 GMT 2012 Rank 207 Aligned Residues 103 % Identity 23% Template c1r5nA_ PDB info PDB header:translation Chain: A: PDB Molecule:eukaryotic peptide chain release factor gtp- PDBTitle: crystal structure analysis of sup35 complexed with gdp Resolution 2.90 Å

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		97	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure								.
Query SS confidence								.
Query Sequence		A	Q	P	P	A	V	.	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A
Query Conservation								.
Alig confidence								.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	K	E	H	V	N	I	V	F	I	G	H	V	D	A	G	K	S	T	L	G	G	N	I	L	F	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	M	V	D	K	R	T	M	E	K	I	E	R	E	A	K	R	A	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S													T	T	S	S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.											.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	.	.	.	.	.	.	.	.	.	.	Q	D	A	A	N	T	A	K	A	F	N	E	A	L	P	L	T	G	V
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	E	T	E	H	R	R	F	S	L	L	D	A	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	Q	A	D	I	G	V	L	V	I	S	A	R	R	G	E	F	E	A	G	F	E	R	G	G	Q	T	R	E	H	A	V	L	A	R	T	Q	G	I	N	H	L	V	V
Template Known Secondary structure		.	.	.	.			S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S		S									S	T	T					T	T	S	S	S													T	T		S	S
Template Predicted Secondary structure		.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						312	.	.	.	.	.	.	.	320	.	.	.	.	.																		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
		246	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	T	K	V	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I	N	K	M	D
Template Known Secondary structure						S	S
Template Predicted Secondary structure
Template SS confidence
		382	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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