Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGD7
Confidence97.42%DateThu Jan 5 11:28:50 GMT 2012
Rank186Aligned Residues131
% Identity18%Templatec1qvrB_
PDB info PDB header:chaperoneChain: B: PDB Molecule:clpb protein; PDBTitle: crystal structure analysis of clpb
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   78.80.........90.........100.........110.........120.........130.........140.........150.......
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Query Sequence  VRNELVAAMGEENQTLNLAAQPPAVVLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSADVYRPAAIKQLETLAEQVGV
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Template Sequence  AIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATLFDTEEAMIRIDMTEYMEKHAVSRLQ. . . . . . . .
Template Known Secondary structure  GGGTS
SSS
SBSSSSSSSSGGG
TTT

SSGGGGG

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   566...570.........580.........590.........600.........610.........620.........630.......
 
   158.160.........170.........180.........190.........200......... 210.........220.......
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Query Sequence  DFFPSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIKQVH. . . . . . . . . . ASINPVETLFVVDAMTGQ
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Template Sequence  . . . . . . . . . . . . . . . . . LTEAVRRRPYSVILFDEIEKAH. . PDVFNILLQILDDGRLTDSHGRTVDFRNTVIILTSNLGS
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SSSSGGGS
..TTT

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   652.......660.........670... ......680.........690.........700.........710..
 
   228.230.....
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Query Sequence  DAANTAKA
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Template Conservation          
Template Sequence  PLILEGLQ
Template Known Secondary structure 
Template Predicted Secondary structure 

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   713......720
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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