Job Description P0AGD7 Confidence 95.33% Date Thu Jan 5 11:28:50 GMT 2012 Rank 475 Aligned Residues 55 % Identity 18% Template c1ojlF_ PDB info PDB header:response regulator Chain: F: PDB Molecule:transcriptional regulatory protein zrar; PDBTitle: crystal structure of a sigma54-activator suggests the2 mechanism for the conformational switch necessary for3 sigma54 binding Resolution 3.0 Å

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		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	I	V	R	N	E	L	V	A	A	M	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		M	Q	H	L	L	N	E	I	A	M	V	A	P	S	D	A	T	.	.	.	.	.	.	.	.	.	.	.	V	L	I	H	G	D	S	G	T	G	K	E	L	V	A	R	A	L	H	A	C	S	A	.	R	S	D	R	P	L	V	T	L	N	C	A	A	L	N
Template Known Secondary structure														S	T	T			.	.	.	.	.	.	.	.	.	.	.							T	T	S	S												S	S	.		S	S	S								T	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.												.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions