 |
Job Description | P0AGD7 | Confidence | 95.86% | Date | Thu Jan 5 11:28:50 GMT 2012 |
Rank | 415 | Aligned Residues | 60 |
% Identity | 18% | Template | c1iqpF_ |
PDB info |
PDB header:replication | Chain: F: PDB Molecule:rfcs; |
PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus
|
Resolution | 2.80 Å |
|
 |
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | A | A | Q | P | P | A | V | V | L | M | A | G | L | Q | G | A | G | K | T | T | S | V | G | K | L | G | K | F | L | R | E | K | H | K | K | K | V | L | V | V | S | A | D | V | Y | R | P | A | A | I | K | Q | L | E | T | L | A | E | Q | V |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|
|
|   |
|   |
|
|   |
|
|
|
|   |   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
Template Sequence |   |
V | K | T | G | S | M | P | H | L | L | F | A | G | P | P | G | V | G | K | T | T | A | A | L | A | L | A | R | E | L | F | G | E | . |
N | W | R | H | N | F | L | E | L | N | A | S | D | E | R | G | I | N | V | I | R | E | K | V | K | E | F |
Template Known Secondary structure |   |
 | T | T | T |
|
|
|  |  |  |  |  | S |
| T | T | S | S | T | T |  |  |  |  |  |  |  |  |  |  |  | G | G | . | G |  |  |  |  |  |  |  |  |  | T | T | T | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|  |  |  |  |  |
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|