Job Description P0AGD7 Confidence 96.84% Date Thu Jan 5 11:28:50 GMT 2012 Rank 287 Aligned Residues 107 % Identity 18% Template c1gm5A_ PDB info PDB header:helicase Chain: A: PDB Molecule:recg; PDBTitle: structure of recg bound to three-way dna junction Resolution 3.24 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	I	V	R	N	E	L	V	A	A	M	G	E	E	N	Q	T	L	N	L	A	A	Q	P	P	A	V	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.																			.																							.	.
Template Conservation														.	.	.	.	.	.	.	.	.																			.																							.	.
Template Sequence		Q	K	R	A	H	Q	E	I	R	N	D	M	.	.	.	.	.	.	.	.	.	I	S	E	K	P	M	N	R	L	L	Q	G	D	V	G	S	G	K	.	T	V	V	A	Q	L	A	I	L	D	N	Y	E	A	G	F	Q	T	A	F	M	V	.	.	P	T	S	I	L	A	I	Q	H	Y	R	R	T	V	E	S
Template Known Secondary structure														.	.	.	.	.	.	.	.	.		S	S	S										S	S	S	S		.															T	S							.	.	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.																			.																							.	.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.										.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.		.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.			.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440
		155				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		V	.	.	.	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L	K	E	A	K	L	K	F	Y	D	V	L	L	V	D	T	A	G	R	L
Query Conservation			.	.	.
Alig confidence			.	.	.																	.																.
Template Conservation																						.																.
Template Sequence		F	S	K	F	N	I	H	V	A	L	L	I	G	A	T	T	P	S	E	K	.	E	K	I	K	S	G	L	R	N	G	Q	I	D	V	V	.	I	G	T	H	A	L	I
Template Known Secondary structure			T		S	S								S	S	S						.									S	S						.				T	T
Template Predicted Secondary structure																						.																.
Template SS confidence
		441	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460		.	.	.	.	.	.	.	.	.	470	.	.	.	.	.		.	.	.	.	480	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions