Job Description P0AGD7 Confidence 97.55% Date Thu Jan 5 11:28:50 GMT 2012 Rank 163 Aligned Residues 128 % Identity 19% Template c1g7cA_ PDB info PDB header:translation Chain: A: PDB Molecule:elongation factor 1-alpha; PDBTitle: yeast eef1a:eef1ba in complex with gdpnp Resolution 2.05 Å

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		98	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		Q	P	P	A	V	.	V	L	M	A	G	L	Q	G	A	G	K	T	T	S	V	G	K	L	G	K	F	L	R	E	K	H	K	K	K	V	L	V	V	S	A	D	V	Y	R	P	A	A	I	K	Q	L	E	T	L	A	E	Q	V	G	V	D	F	F	P	S	D	V	G	Q	K	P	V	D	I	V	N	A	A	L
Query Conservation							.
Alig confidence							.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template Sequence		E	K	S	H	I	N	V	V	V	I	G	H	V	D	S	G	K	S	T	T	T	G	H	L	I	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	C	G	G	I	D	K	R	T	I	E	K	F	E	K	E	A	A	E	.	.	.	.	.	L	G	K	G	S	F	K	Y	A	W	V	L	D	K	L
Template Known Secondary structure														T	T	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			S		S	S											G	G	G	.	.	.	.	.	G	S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.																30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.						.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
		177	.	.	180	.															.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.									230	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Query Sequence		K	E	A	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	F	Y	D	V	L	L	V	D	T	A	G	R	L	H	V	D	E	A	M	M	D	E	I	K	Q	V	H	A	S	I	N	P	V	E	T	L	F	V	V	D	A	M	T	G	Q	D	A	.	.	.	.	.	.	.	.	A	N	T	A	K
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.																							.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.
Template Sequence		K	A	E	R	E	R	G	I	T	I	D	I	A	L	W	K	F	E	T	P	K	Y	Q	V	T	V	I	D	A	P	G	H	R	D	F	I	K	N	M	.	.	.	.	.	.	I	T	G	T	S	Q	A	D	C	A	I	L	I	I	A	G	G	V	G	E	F	E	A	G	I	S	K	D	G	Q	T	R	E	H	A
Template Known Secondary structure								T				S		S							S	S												T	T						.	.	.	.	.	.			S	S	S			S									S								T		T	T
Template Predicted Secondary structure																																									.	.	.	.	.	.
Template SS confidence
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.							.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		A	F	N	E	A	L	P	L	T	G	V	V	L	.	.	T	K	V	D
Query Conservation															.	.
Alig confidence															.	.
Template Conservation
Template Sequence		L	L	A	F	T	L	G	V	R	Q	L	I	V	A	V	N	K	M	D
Template Known Secondary structure							T	T											T	T
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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