Job Description P0A881 Confidence 81.96% Date Thu Jan 5 11:07:08 GMT 2012 Rank 145 Aligned Residues 59 % Identity 24% Template c3l1pA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:pou domain, class 5, transcription factor 1; PDBTitle: pou protein:dna complex Resolution 2.80 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.	.	.							.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.											.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.											.	.	.	.	.	.
Query Sequence		L	T	P	D	E	R	E	A	L	G	T	R	V	R	I	V	E	E	L	L	R	G	E	M	S	Q	R	E	L	K	N	E	L	G	.	.	.	.	.	.	A	G	I	A	T	I	T	R	G	S	.	.	.	.	.	.	N	S	L	K	A	A	P	V	E	L	R	Q	W	L	E	E	V
Query Conservation																																				.	.	.	.	.	.											.	.	.	.	.	.
Alig confidence																		.	.																	.	.	.	.	.	.											.	.	.	.	.	.
Template Conservation																		.	.
Template Sequence		A	L	Q	K	E	L	E	Q	F	A	K	L	L	K	Q	K	.	.	R	I	T	L	G	Y	T	Q	A	D	V	G	L	T	L	G	V	L	F	G	K	V	F	S	Q	T	T	I	S	R	F	E	A	L	Q	L	S	L	K	N	M	S	K	L	R	P	L	L	E	K	W	V	E	E	A
Template Known Secondary structure																		.	.				T	T															S													T	T		S
Template Predicted Secondary structure																		.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions