Job Description P0A881 Confidence 88.75% Date Thu Jan 5 11:07:08 GMT 2012 Rank 94 Aligned Residues 56 % Identity 21% Template c3d1nK_ PDB info PDB header:transcription regulator/dna Chain: K: PDB Molecule:pou domain, class 6, transcription factor 1; PDBTitle: structure of human brn-5 transcription factor in complex2 with corticotrophin-releasing hormone gene promoter Resolution 2.51 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.							.	.	.	80	.	.	.	.								.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.									.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.									.	.	.	.	.	.	.
Query Sequence		P	D	E	R	E	A	L	G	T	R	V	R	I	V	E	E	L	L	R	G	E	M	S	Q	R	E	L	K	N	E	L	G	.	.	.	.	.	.	A	G	I	A	T	I	T	R	.	.	.	.	.	.	.	G	S	N	S	L	K	A	A	P	V	E	L	R	Q	W	L	E	E	V
Query Conservation																																		.	.	.	.	.	.									.	.	.	.	.	.	.
Alig confidence																	.	.																.	.	.	.	.	.									.	.	.	.	.	.	.								.
Template Conservation																	.	.																																												.
Template Sequence		X	E	E	I	R	E	F	A	K	N	F	K	I	R	R	.	.	L	S	L	G	L	T	Q	T	Q	V	G	Q	A	X	T	A	T	E	G	P	A	Y	S	Q	S	A	I	S	R	F	E	K	L	D	I	T	P	K	S	A	Q	K	L	.	K	P	V	L	E	K	W	L	N	E	A
Template Known Secondary structure																	.	.		T	T	T													S	S	S														T		S									.
Template Predicted Secondary structure																	.	.																																												.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions