Job Description P0A881 Confidence 28.76% Date Thu Jan 5 11:07:08 GMT 2012 Rank 297 Aligned Residues 63 % Identity 16% Template c2bgcA_ PDB info PDB header:transcription Chain: A: PDB Molecule:prfa; PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes Resolution 2.3 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.									.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.																		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query SS confidence																	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Query Sequence		Q	N	D	L	H	L	P	L	L	N	L	M	L	T	P	.	.	.	.	.	.	.	.	D	E	R	E	A	L	G	T	R	V	R	I	V	E	E	L	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	E	M	S	Q	R	E	L	K	N	E	L	G	A	G	I	A	T	.	I	T	R
Query Conservation																	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Alig confidence																	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation
Template Sequence		N	L	T	H	F	F	Y	V	F	Q	T	L	Q	K	Q	V	S	Y	S	L	A	K	F	N	D	F	S	I	N	G	K	L	G	S	I	C	S	Q	L	L	I	L	T	Y	V	Y	G	K	E	T	P	D	G	I	K	I	T	L	D	N	L	T	M	Q	E	L	G	Y	S	S	G	I	A	H	S	S	A	V	S	R
Template Known Secondary structure																													T	T																						T	T							S											T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	N	S	L	K	A	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	I	S	K	L	K	Q	E	K
Template Known Secondary structure									T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions