Job Description P0A881 Confidence 83.07% Date Thu Jan 5 11:07:08 GMT 2012 Rank 138 Aligned Residues 73 % Identity 11% Template c1rp3G_ PDB info PDB header:transcription Chain: G: PDB Molecule:rna polymerase sigma factor sigma-28 (flia); PDBTitle: cocrystal structure of the flagellar sigma/anti-sigma2 complex, sigma-28/flgm Resolution 2.30 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.							.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.
Query Sequence		S	P	Y	S	A	A	M	A	E	Q	R	H	Q	E	W	L	R	F	V	D	L	L	K	N	A	Y	Q	N	D	L	H	L	P	L	L	N	L	M	.	.	.	.	.	.	L	T	P	D	E	R	E	A	L	G	T	R	V	R	I	V	E	E	L	L	R	G	E	M	S	Q	R	E	L	K	N	E	L	G	A	G
Query Conservation																																								.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		K	T	L	D	K	I	N	F	S	Y	I	L	S	L	E	E	V	F	R	D	F	A	R	D	Y	S	E	E	V	I	K	R	E	L	T	E	K	V	K	E	A	V	S	K	L	P	E	R	E	K	L	V	I	Q	L	I	F	.	.	.	.	.	.	.	Y	E	E	L	P	A	K	E	V	A	K	I	L	E	T	S
Template Known Secondary structure																																													T	S													.	.	.	.	.	.	.	T	S												T	S
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		79	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	T	I	T	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	S	R	V	S	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		214	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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