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Job DescriptionP13000
Confidence99.91%DateThu Jan 5 11:33:19 GMT 2012
Rank23Aligned Residues207
% Identity18%Templatec3zq6D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:putative arsenical pump-driving atpase; PDBTitle: adp-alf4 complex of m. therm. trc40
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  SKRYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYKPVASGSEKTPEGLRNSDALALQRNSSLQLDYATVNPYTFAEPT
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Template Sequence  KTTFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPAHSLSDSLEREIGHT. . . . . . . . . . . . PTKITENLYAVEI
Template Known Secondary structure  B
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   13......20.........30.........40.........50.........60....... ..70.........80
 
   82.......90.........100... ......110.........120.........130.......
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Query Sequence  SPHIISAQEGRPIESLVMSAGL. . . . . . . . . . . . . . . . . RALEQQADWVLVEGAGGWFTPLSDTFTFADWVTQ. . . . . . .
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Template Sequence  DPEVAMEEYQAKLMLQDQMDMASMSPGIDEAAAFDQFLRYMTTDEYDIVIFDTAPTGHTLRLLSFPEIMDSWVGKMIKIR
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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   138.140.........150.........160.........170
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EQLPVILVVGVKLGCINHAMLTAQVIQHAGLTL
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Template Sequence  RQIGSMAKAFKNILPFMGDEEEEDRALQDMEATKKQINAAREVMSDPERTSFKMVVIPEEMSIYESERAMKALEKYSIHA
Template Known Secondary structure  TTTT

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   174.....180.........190.........200.........210.........220.........230.........240.........250...
 
   171........180.... .....190.........200.........210.........220
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Query Sequence  AGWVANDVTPPGKR. . . . . . . . . . HAEYMTTLTRMIPAPLLGEIPWLAENPENAATGKYI
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Template Sequence  DGVIVNQVLPEESDCEFCNARRKLQQERLKQIREKFSDKVVAEVPLLKKEAKGIETLEKI
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   254.....260.........270.........280.........290.........300.........310...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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