Job Description P13000 Confidence 99.95% Date Thu Jan 5 11:33:19 GMT 2012 Rank 12 Aligned Residues 206 % Identity 18% Template c3kjgB_ PDB info PDB header:hydrolase, metal binding protein Chain: B: PDB Molecule:co dehydrogenase/acetyl-coa synthase complex, accessory PDBTitle: adp-bound state of cooc1 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	K	R	Y	F	V	T	G	T	D	T	E	V	G	K	T	V	A	S	C	A	L	L	Q	A	A	K	A	A	G	Y	R	T	A	G	Y	K	P	V	A	S	G	S	E	K	T	P	E	G	L	R	N	S	D	A	L	A	L	Q	R	N	S	S	L	Q	L	D	Y	A	T	V	N	P	Y	T	F	A	E	P
Query Conservation
Alig confidence				.	.						.
Template Conservation				.	.						.
Template Sequence		M	K	.	.	L	A	V	A	G	.	K	G	G	V	G	K	T	T	V	A	A	G	L	I	K	I	M	A	S	D	Y	D	K	I	Y	A	V	D	G	D	P	D	S	C	L	G	Q	T	L	G	L	S	I	E	E	A	Y	A	I	T	P	L	I	E	M	K	D	E	I	R	E	K	T	G	D	G	G	L	L	I
Template Known Secondary structure				.	.						.		T	T	S														T	T	T	S	S									T	T	S						T	T								T	S			G	G	G									T		S	S	S
Template Predicted Secondary structure				.	.						.
Template SS confidence
		1	.			.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.																									.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		T	S	P	H	I	I	S	A	Q	E	G	R	P	I	E	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	M	S	A	G	L	R	A	L	.	E	Q	Q	A	D	W	V	L	V	E	G	A	G	G	W	F	T	P	L	S	D	T	F	T	F	A	D	W	V
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																													.
Template Conservation																																																																																	.
Template Sequence		L	N	P	K	V	D	G	D	L	D	K	Y	G	R	Y	I	D	D	K	I	F	L	I	R	M	G	E	I	K	K	G	G	S	Q	C	Y	C	R	E	N	S	F	L	G	S	V	V	S	A	L	F	L	D	K	K	E	A	V	V	M	D	M	G	A	G	I	E	H	L	T	R	G	T	A	K	A	V	D	M	.
Template Known Secondary structure		S	S				G	G	G	G	G	G	S	S			S	S	S	S												S		S	S																			T			S								T	T		T	T							T	T		S		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Q	E	Q	L	P	V	I	L	V	V	G	V	K	L	G	C	I	N	H	A	M	L	T	A	Q	V	I	Q	H	A	G	L	T	L	A	G	W	V	A	N	D	V	T	P	P	G	K	R	H	A	E	Y	M	T	T	L	T	R	M	I	P	A	P	L	L	G	E	I	P	W	L	A	E	N	P	E	N	A	A
Query Conservation
Alig confidence		.	.	.	.	.	.																																									.	.	.	.
Template Conservation		.	.	.	.	.	.																																									.	.	.	.
Template Sequence		.	.	.	.	.	.	M	I	A	V	I	E	P	N	L	N	S	I	K	T	G	L	N	I	E	K	L	A	G	D	L	G	I	K	K	V	R	Y	V	I	N	K	V	R	N	I	.	.	.	.	K	E	E	K	L	I	K	K	H	L	P	E	D	K	I	L	G	I	I	P	Y	N	E	L	F	I	E	L	S	L
Template Known Secondary structure		.	.	.	.	.	.							S	S																T	T	T													S		.	.	.	.										S		T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.																																									.	.	.	.
Template SS confidence
								157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		216	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	K	Y	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	G	E	E	I
Template Known Secondary structure		T	T			T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions