Job Description P13000 Confidence 99.92% Date Thu Jan 5 11:33:19 GMT 2012 Rank 21 Aligned Residues 196 % Identity 10% Template c3fkqA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:ntrc-like two-domain protein; PDBTitle: crystal structure of ntrc-like two-domain protein (rer070207001320)2 from eubacterium rectale at 2.10 a resolution Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.								.	70	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.
Query Sequence		M	S	K	R	Y	F	V	T	G	T	D	T	E	V	G	K	T	V	A	S	C	A	L	L	Q	A	A	K	A	A	G	Y	R	T	A	G	Y	K	P	V	A	S	G	S	E	K	T	P	E	G	L	R	N	S	D	A	L	A	L	Q	R	N	S	S	L	Q	L	D	.	.	.	.	.	.	.	Y	A	T	V	N
Query Conservation																																																																						.	.	.	.	.	.	.
Alig confidence																																																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	S	S	V	V	I	F	T	S	P	C	G	G	V	G	T	S	T	V	A	A	A	C	A	I	A	H	A	N	X	G	K	K	V	F	Y	L	N	I	E	Q	C	G	T	T	D	V	F	F	Q	A	E	G	N	A	T	X	S	D	V	I	Y	S	L	K	S	R	K	A	N	L	L	L	K	L	E	S	C	I	K
Template Known Secondary structure		S									S	S	T	T	S	S																T										T	T										S		S												S			S									T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		P	Y	T	F	A	E	P	T	S	P	H	I	I	S	A	Q	E	G	R	P	I	E	S	L	V	M	S	A	G	L	R	A	L	E	Q	.	.	Q	A	D	W	V	L	V	E	G	A	G	G	W	F	T	P	L	S	D	T	F	T	F	A	D	W	V	T	Q	E	Q	L	P	V	I	L	V	V	G	V	K	L	G
Query Conservation																																					.	.
Alig confidence																																					.	.																											.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.
Template Sequence		Q	S	Q	E	G	V	S	Y	F	S	S	T	K	V	A	L	D	I	L	E	I	S	Y	A	D	I	D	T	L	I	G	N	I	Q	G	X	D	N	Y	D	E	I	I	V	D	L	P	F	S	L	E	I	E	K	L	K	L	L	S	K	A	W	R	.	.	.	.	.	.	.	I	I	V	V	N	D	G	S	Q	L
Template Known Secondary structure				T	T	S								S	S	G	G	G	G	G	G																T	S			S																			T	T		S		.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.								.	.	.	.	270	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.								.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																			.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.
Query Sequence		C	I	N	H	A	M	L	T	A	Q	V	I	Q	H	A	G	L	.	.	.	.	.	.	.	T	L	A	G	W	V	A	N	D	V	T	P	P	G	K	R	H	A	E	Y	M	T	T	L	T	R	M	I	P	A	P	L	L	G	E	I	P	W	L	A	E	N
Query Conservation																			.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.	.	.	.
Template Sequence		S	N	Y	K	F	X	R	A	Y	E	S	V	V	L	L	E	Q	N	D	D	I	N	I	I	R	N	X	N	X	I	Y	N	K	F	S	N	K	N	S	E	X	.	.	.	.	.	.	.	L	S	N	I	S	I	K	T	I	G	G	A	P	R	Y	E	H	A
Template Known Secondary structure																	T	T	S	T	T				G	G	G							S			T	T	T				.	.	.	.	.	.	.			S		S											T	T
Template Predicted Secondary structure																																											.	.	.	.	.	.	.
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.								.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions