Job Description P13000 Confidence 99.39% Date Thu Jan 5 11:33:19 GMT 2012 Rank 40 Aligned Residues 171 % Identity 16% Template c2qy9A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:cell division protein ftsy; PDBTitle: structure of the ng+1 construct of the e. coli srp receptor2 ftsy Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	R	Y	F	V	T	G	T	D	T	E	V	G	K	T	V	A	S	C	A	L	L	Q	A	A	K	A	A	G	Y	R	T	A	G	Y	K	P	V	A	S	G	S	E	K	T	P	E	G	L	R	N	S	D	A	L	A	L	Q	R	N	S	S	L	Q	L	D	Y	A	T	V	N	P	Y	T	F	A	E	P	T
Query Conservation
Alig confidence												.																														.	.	.	.	.	.	.	.	.																															.
Template Conservation												.																														.	.	.	.	.	.	.	.	.																															.
Template Sequence		P	F	V	I	L	M	V	G	V	N	.	G	V	G	K	T	T	T	I	G	K	L	A	R	Q	F	E	Q	Q	G	K	S	V	M	L	A	A	G	D	T	.	.	.	.	.	.	.	.	.	F	R	A	A	A	V	E	Q	L	Q	V	W	G	Q	R	N	N	I	P	V	I	A	Q	H	T	G	A	D	S	A	.
Template Known Secondary structure		T									T	.	T	S															T	T	T										T	.	.	.	.	.	.	.	.	.	T															T	T							S	T	T					.
Template Predicted Secondary structure												.																														.	.	.	.	.	.	.	.	.																															.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.										.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.								.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																											.																																	.	.	.	.	.	.	.
Query SS confidence																											.																																	.	.	.	.	.	.	.
Query Sequence		S	P	H	I	I	S	A	Q	E	G	R	P	I	E	S	L	V	M	S	A	G	L	R	A	L	.	E	Q	Q	A	D	W	V	L	V	E	G	A	G	G	W	F	T	P	L	S	D	T	F	T	F	A	D	W	V	T	Q	E	.	.	.	.	.	.	.	Q	L	P	V	I	L	V	V	G	V	K	L	G	C	I
Query Conservation																											.																																	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.																																	.	.	.	.	.	.	.															.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	I	F	D	A	I	Q	A	A	K	A	R	N	I	D	V	L	I	A	D	T	A	G	R	L	Q	N	K	S	H	L	M	E	E	L	K	K	I	V	R	V	M	K	K	L	D	V	E	A	P	H	E	V	M	L	T	I	D	A	S	T	G	Q	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		S										G	G	G																T	T	T		T	T			S								G	G	G	T		.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																																	.
Template SS confidence
																	362	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	A	M	L	T	A	Q	V	I	Q	H	A	G	L	T	L	A	G	W	V	A	N	D	V	T	P	P	G	K	R	H	A	E	Y	M	T	T	L	T	R	M	I	P	A	P	L	L	G	E
Query Conservation
Alig confidence														.	.																						.	.
Template Conservation														.	.																						.	.
Template Sequence		N	A	V	S	Q	A	K	L	F	H	E	A	.	.	V	G	L	T	G	I	T	L	T	K	L	D	G	T	A	K	G	G	V	I	F	.	.	S	V	A	D	Q	F	G	I	P	I	R	Y	I
Template Known Secondary structure														.	.	S											T	T		T	T	T	T				.	.
Template Predicted Secondary structure														.	.																						.	.
Template SS confidence
		426	.	.	.	430	.	.	.	.	.	.	.			.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.			.	460	.	.	.	.	.	.	.	.	.	470	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions