Return to main results Retrieve Phyre Job Id

Job DescriptionP13000
Confidence96.60%DateThu Jan 5 11:33:19 GMT 2012
Rank171Aligned Residues34
% Identity26%Templatec2pbrB_
PDB info PDB header:transferaseChain: B: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase (aq_969) from aquifex aeolicus2 vf5
Resolution1.96 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30........
Predicted Secondary structure 










Query SS confidence 


































Query Sequence  RYFVTGTDTEVGKTVASCALLQAAKAAGYRTAGYK
Query Conservation   
 
 
  








  

  

  
  

 

Alig confidence 





.



























Template Conservation 

 
 
.  





 
  

  
           
Template Sequence  LIAFEG. IDGSGKTTQAKKLYEYLKQKGYFVSLYR
Template Known Secondary structure 
.
TTS
TT

Template Predicted Secondary structure 
.









Template SS confidence 


































   2..... ..10.........20.........30.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions