Job Description P25741 Confidence 98.48% Date Thu Jan 5 11:42:28 GMT 2012 Rank 267 Aligned Residues 145 % Identity 14% Template c4aaaA_ PDB info PDB header:transferase Chain: A: PDB Molecule:cyclin-dependent kinase-like 2; PDBTitle: crystal structure of the human cdkl2 kinase domain Resolution 1.53 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	F	A	E	V	K	K	L	N	G	E	V	F	R	E	L	E	T	R	R	T	L	R	F	E	L	S	G	K	S	Y	F	L	K	W	H	K	G	T	T	L	K	E	I	I	K	N	L	L	S	L	R	M	P	V	L	G	A	D	R	E	W	H	A	I	H	R	L	S	D	V	G	V	D	T	M	K	G	I
Query Conservation
Alig confidence																				.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.																	.	.	.	.	.	.	.	.	.
Template Sequence		E	K	Y	E	N	L	G	L	V	G	E	G	S	Y	G	M	V	M	.	.	.	K	C	R	N	K	D	T	G	R	I	V	A	I	K	K	F	.	.	.	.	.	.	.	.	.	L	E	S	D	D	D	K	M	V	K	K	I	A	M	R	E	I	K	L	L	K	Q	L	R	H	E	N	L	V	N	L	L	E	V
Template Known Secondary structure		G	G							G	G	G	G	T	T	S	S			.	.	.					T	T	T										.	.	.	.	.	.	.	.	.		S		S	S																					T	T	B
Template Predicted Secondary structure																				.	.	.																	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	G	E	K	G	L	N	P	L	T	R	A	S	F	I	I	T	E	D	L	T	P	T	I	S	L	E	D	Y	C	A	D	W	A	V	N	P	P	D	I	R	V	K	R	M	L	I	A	R	V	A	T	M	V	R	K	M	H	T	A	G	I	N	H	R	D	C	Y	I	C	H	F	L	L	H	L	P	F	T
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.																								.	.
Template Conservation				.	.	.	.	.	.	.	.																								.	.
Template Sequence		C	K	.	.	.	.	.	.	.	.	K	K	K	R	W	Y	L	V	F	E	F	V	D	H	T	I	L	D	D	L	E	L	F	.	.	P	N	G	L	D	Y	Q	V	V	Q	K	Y	L	F	Q	I	I	N	G	I	G	F	C	H	S	H	N	I	I	H	R	D	I	K	P	E	N	I	L	V	S	Q	S	G	V
Template Known Secondary structure				.	.	.	.	.	.	.	.		T	T										S										S	.	.	T	T																								T	T								G	G	G					T	T	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.																								.	.
Template SS confidence
		70	.									.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	D	E	L	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	L	C	D	F	G
Template Known Secondary structure								T
Template Predicted Secondary structure
Template SS confidence
		140	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions