Job Description P25741 Confidence 99.96% Date Thu Jan 5 11:42:28 GMT 2012 Rank 1 Aligned Residues 186 % Identity 14% Template c3qa8A_ PDB info PDB header:immune system, signaling protein Chain: A: PDB Molecule:mgc80376 protein; PDBTitle: crystal structure of inhibitor of kappa b kinase beta Resolution 3.60 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	N	G	E	V	F	R	E	L	E	T	R	R	T	L	R	F	E	L	S	G	K	S	Y	F	L	K	W	H	K	G	T	T	L	K	E	I	I	K	N	L	L	S	L	R	M	P	V	L	G	A	D	R	E	W	H	A	I	H	R	L	S	D	V	G	V	D	T	M	K	G	I	G	F	G	E	K	G
Query Conservation
Alig confidence														.	.	.																	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Conservation														.	.	.																	.	.	.	.	.	.	.	.	.	.																																			.	.
Template Sequence		E	R	L	G	T	G	G	F	G	Y	V	L	.	.	.	R	W	I	H	Q	D	T	G	E	Q	V	A	I	K	Q	C	.	.	.	.	.	.	.	.	.	.	R	Q	E	L	S	P	K	N	R	E	R	W	C	L	E	I	Q	I	M	K	K	L	N	H	P	N	V	V	S	A	R	E	V	P	.	.	D	G	L
Template Known Secondary structure						B		S	S	S	B			.	.	.					T	T	T	T									.	.	.	.	.	.	.	.	.	.		S																						B	T	T	B								.	.	T	T	T
Template Predicted Secondary structure														.	.	.																	.	.	.	.	.	.	.	.	.	.																																			.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.											.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80			.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.
Predicted Secondary structure																																.																																													.	.	.
Query SS confidence																																.																																													.	.	.
Query Sequence		L	N	P	L	T	R	A	S	F	I	I	T	E	D	L	T	P	T	I	S	L	E	D	Y	C	A	D	W	A	V	.	N	P	P	D	I	R	V	K	R	M	L	I	A	R	V	A	T	M	V	R	K	M	H	T	A	G	I	N	H	R	D	C	Y	I	C	H	F	L	L	H	L	P	F	T	.	.	.	G	R
Query Conservation																																.																																													.	.	.
Alig confidence																																.																																													.	.	.
Template Conservation
Template Sequence		Q	K	L	A	P	N	D	L	P	L	L	A	M	E	Y	C	E	G	G	D	L	R	K	Y	L	N	Q	F	E	N	C	C	G	L	K	E	G	P	I	R	T	L	L	S	D	I	S	S	A	L	R	Y	L	H	E	N	R	I	I	H	R	D	L	K	P	E	N	I	V	L	Q	P	G	P	Q	R	L	I	H	K
Template Known Secondary structure						T	T	S	S									S	S		B							S	S	S		T	T				S	S																			T	T	B							S	T	T							S	S	S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.						220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		E	D	E	L	K	I	S	V	I	D	L	H	R	A	Q	I	R	A	K	V	P	R	R	W	R	D	K	D	L	I	G	L	Y	F	S	S	M	N	I	G	L	T	.	.	.	.	.	Q	R	D	I	W	R	F	M	K	V	Y	F
Query Conservation																																												.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		I	I	D	L	G	Y	A	K	E	L	D	Q	G	E	L	C	T	E	F	V	.	.	.	.	.	.	.	.	.	G	T	L	Q	Y	L	A	P	E	L	L	E	Q	K	K	Y	T	V	T	V	D	Y	W	S	F	G	T	L	A	F
Template Known Secondary structure				S						B	T	T	S									.	.	.	.	.	.	.	.	.	S			T	T		S	S		S	S			S			S	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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