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Job DescriptionP25741
Confidence99.40%DateThu Jan 5 11:42:28 GMT 2012
Rank172Aligned Residues200
% Identity12%Templatec3hkoA_
PDB info PDB header:transferaseChain: A: PDB Molecule:calcium/calmodulin-dependent protein kinase with a kinase PDBTitle: crystal structure of a cdpk kinase domain from cryptosporidium parvum,2 cgd7_40
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  ATLWRGKDAFAEVKKLNGEVFRELETRRTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRLSDVG
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Template Sequence  GSLLELQKKYHLKGAIGQGSYGVVR. . . VAIENQTRAIRAIKIM. . . . . . . . . NKNKIRQKDVERIKTEVRLMKKLHHPN
Template Known Secondary structure  B

SS
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   1........10.........20..... ....30.........40. ........50.........60........
 
   8990.........100.........110.........120.........130. .
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Query Sequence  VDTMKGIGFGEKGLNPLTRASFIITEDLTPTISLEDYCADWAV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . N
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Template Sequence  IARLYEVYE. . . . . . . . DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIFRESLDF
Template Known Secondary structure  B

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   72.......80 .........90.........100.........110.........120.........130.........140...
 
   133......140.........150.........160.........170.........180.........190.........200.........210..
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Query Sequence  PPDIRVKRMLIARVATMVRKMHTAGINHRDCYICHFLLHLPFTGREDELKISVIDLHRAQIRAKVPRRWRDKDLIGLYFS
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Template Sequence  VQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGAGTPYFVA. . . PEVLNT
Template Known Secondary structure  TT




GGGS
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   146...150.........160.........170.........180.........190.........200.........210...... ...220..
 
   213......220.........230.
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Query Sequence  SMNIGLTQRDIWRFMKVYF
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Template Sequence  TNESYGPKCDAWSAGVLLH
Template Known Secondary structure  SSS


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   231........240.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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