Job Description P25741 Confidence 99.75% Date Thu Jan 5 11:42:28 GMT 2012 Rank 51 Aligned Residues 203 % Identity 13% Template c3g0eA_ PDB info PDB header:transferase Chain: A: PDB Molecule:mast/stem cell growth factor receptor; PDBTitle: kit kinase domain in complex with sunitinib Resolution 1.60 Å

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		5	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.								.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure											.																														.	.	.	.	.	.	.
Query SS confidence											.																														.	.	.	.	.	.	.
Query Sequence		K	E	P	L	A	T	L	W	R	.	G	K	D	A	F	A	E	V	K	K	L	N	G	E	V	F	R	E	L	E	T	R	R	T	L	R	F	E	L	.	.	.	.	.	.	.	S	G	K	S	Y	F	L	K	W	H	K	G	T	T	L	K	E	I	I	K	N	L	L	S	L	R	M	P	V	L	G	A	D	R
Query Conservation											.																														.	.	.	.	.	.	.
Alig confidence											.																			.	.	.	.	.							.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	L	P	Y	D	H	K	W	E	F	P	R	N	R	L	S	F	G	K	T	L	G	A	G	A	F	G	K	.	.	.	.	.	V	V	E	A	T	A	Y	G	L	I	K	S	D	A	A	M	T	V	A	V	K	M	L	.	.	.	.	.	.	.	.	.	.	K	P	S	A	H	L	T	E	R	E	A	L	M	S
Template Known Secondary structure		G	S				G	G	G	B			G	G	G											S	S			.	.	.	.	.								S	S	S	S	T	T											.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																														.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		575	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.						.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.											.	.	.	.	630	.	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	W	H	A	I	H	R	L	.	S	D	V	G	V	D	T	M	K	G	I	G	F	G	E	K	G	L	N	P	L	T	R	A	S	F	I	I	T	E	D	L	T	P	T	I	S	L	E	D	Y	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	W	A	V	N	P	P	D	I	R	V	K
Query Conservation										.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.														.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.
Template Sequence		E	L	K	V	L	S	Y	L	G	N	H	M	N	I	V	N	L	L	G	A	C	T	.	.	.	.	.	.	.	.	I	G	G	P	T	L	V	I	T	E	Y	C	C	Y	G	D	L	L	N	F	L	R	R	K	R	D	S	F	I	C	S	K	T	S	P	A	I	M	E	D	D	E	L	A	L	D	L	E	D	L
Template Known Secondary structure													T	T	B									.	.	.	.	.	.	.	.	S	S	S	S									T	T		B									G	G	G	G	S		S	S	S					B	T	T	B
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.
Template SS confidence
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.									.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	M	L	I	A	R	V	A	T	M	V	R	K	M	H	T	A	G	I	N	H	R	D	C	Y	I	C	H	F	L	L	H	L	P	F	T	G	R	E	D	E	L	K	I	S	V	I	D	L	H	R	A	Q	I	R	A	K	V	P	R	R	W	R	D	K	D	L	I	G	L	Y	F	S	S	M	N	I	G	L	T
Query Conservation
Alig confidence																																																																															.
Template Conservation																																																																															.
Template Sequence		L	S	F	S	Y	Q	V	A	K	G	M	A	F	L	A	S	K	N	C	I	H	R	D	L	A	A	R	N	I	L	L	T	H	G	R	I	T	K	I	C	D	F	G	L	A	R	D	I	K	N	D	S	N	Y	V	V	K	G	N	A	R	L	P	V	K	W	M	A	P	E	S	I	F	N	C	V	Y	.	T	F
Template Known Secondary structure																		T	T				S			S	G	G	G					T	T	T								G	G	G			G	G	G		T	T	S				T	T					G	G	G	S								T			.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.		.	.
		220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	D	I	W	R	F	M	K	V	Y	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	S	D	V	W	S	Y	G	I	F	L	W
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		849	850	.	.	.	.	.	.	.	.	.	860

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions