Job Description P25741 Confidence 97.87% Date Thu Jan 5 11:42:28 GMT 2012 Rank 289 Aligned Residues 148 % Identity 20% Template c3f2rA_ PDB info PDB header:transferase Chain: A: PDB Molecule:choline kinase alpha; PDBTitle: crystal structure of human choline kinase alpha in complex2 with hemicholinium-3 Resolution 2.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	W	H	A	I	H	R	L	S	D	V	G	V	D	T	M	K	G	I	G	F	G	E	K	G	L	N	P	L	T	R	A	S	F	I	I	T	E	D	L	T	P	T	I	S	L	E	D	Y	C	A	D	W	A	V	N	P	P	D	I	R	V	K	R	M	L	I	A	R	V	A	T	M	V	R	K	M	H	T
Query Conservation
Alig confidence																.												.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Conservation																.												.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	S	V	M	F	A	I	L	A	E	R	S	L	.	G	P	K	L	Y	G	I	F	P	Q	G	.	.	.	.	.	.	.	.	.	.	R	L	E	Q	F	I	P	S	R	R	L	D	T	E	E	L	S	L	P	D	.	.	.	.	.	.	.	.	.	.	I	S	A	E	I	A	E	K	M	A	T	F	H	G
Template Known Secondary structure													T	T	S	.	S								T	T		.	.	.	.	.	.	.	.	.	.													G	G	G	G	G	S			.	.	.	.	.	.	.	.	.	.														T
Template Predicted Secondary structure																.												.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.											.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.											.	.	.	.	.	.	230	.	.	.	.	.	.	.
		156	.																																																															.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	N	H	R	D	C	Y	I	C	H	F	L	L	H	L	P
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	M	P	F	N	K	E	P	K	W	L	F	G	T	M	E	K	Y	L	K	E	V	L	R	I	K	F	T	E	E	S	R	I	K	K	L	H	K	L	L	S	Y	N	L	P	L	E	L	E	N	L	R	S	L	L	E	S	T	P	S	P	V	V	F	C	H	N	D	C	Q	E	G	N	I	L	L	L	E	G
Template Known Secondary structure					S	S			S																	T					S												T	T															T	S									S			S	G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.																.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Query Sequence		F	T	G	R	E	D	E	L	K	I	S	V	I	D	L	H	R	A	Q	I	R	A	K	V	P	R	R	W	R	D	K	D	L	I	G	L	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	M	N	I	G	L	T	Q	R	D	I	W	R	F	M	K	V	Y	F	G	.	.	.	.	.	.
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Alig confidence									.															.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.
Template Conservation									.															.	.	.	.	.	.
Template Sequence		R	E	N	S	E	K	Q	.	K	L	M	L	I	D	F	E	Y	S	S	Y	N	Y	.	.	.	.	.	.	R	G	F	D	I	G	N	H	F	C	E	W	M	Y	D	Y	S	Y	E	K	Y	P	F	F	R	A	N	I	R	K	Y	P	T	K	K	Q	Q	L	H	F	I	S	S	Y	L	P	A	F	Q	D	F	E
Template Known Secondary structure		G	G	G		S	S		.	S							T	T						.	.	.	.	.	.												T	T			T	T		S	S	T	T	S					G	G	G	S																				G	G
Template Predicted Secondary structure									.															.	.	.	.	.	.
Template SS confidence
		318	.	320	.	.	.	.		.	.	.	.	.	330	.	.	.	.	.	.	.	.							.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390
			233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	M	P	L	R	K	I	L	S	L	E	Q	N	L	L	N	M	A	S	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		N	L	S	T	E	E	K	S	I	I	K	E	E	M	L	L	E	V	N	R
Template Known Secondary structure		G	S
Template Predicted Secondary structure
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions