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Job DescriptionP25741
Confidence99.80%DateThu Jan 5 11:42:28 GMT 2012
Rank36Aligned Residues163
% Identity18%Templatec3en9B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:o-sialoglycoprotein endopeptidase/protein kinase; PDBTitle: structure of the methanococcus jannaschii kae1-bud32 fusion2 protein
Resolution2.67 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   36...40.........50.........60.........70.........80.........90.........100.........110.....
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Query Sequence  RTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRLSDVGVDTMKGIGFGEKGLNPLTRASFIITED
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Template Sequence  DIKRDSYLDFDVIIKERVKKGYRD. . . ERLDENIRKSRTAREARYLALVKDFGIPAPYIFDV. . . . . . . . DLDNKRIMMS
Template Known Secondary structure  TT


TTS
...GGGTT




........TTTT
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   346...350.........360......... 370.........380.........390.........400.... .....410....
 
   116...120.........130.........140.........150.........160.........170.........180.........190.....
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Query Sequence  LTPTISLEDYCADWAVNPPDIRVKRMLIARVATMVRKMHTAGINHRDCYICHFLLHLPFTGREDELKISVIDLHRAQIRA
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Template Sequence  YINGKLAKDVIEDN. . . . . . . . . . LDIAYKIGEIVGKLHKNDVIHNDLTTSNFIF. . . . . . . . . DKDLYIIDFGLGKISN
Template Known Secondary structure 


SGGGTTTT
..........TT
S


GGG.........SSS


TT


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   415....420........ .430.........440.........450......... 460.........470.....
 
   196...200.........210.........220.... .....230
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Query Sequence  KVPRRWRDKDLIGLYFSSMNIGLTQRDIW. . RFMKVY
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Template Sequence  . . LDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGY
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   476...480.........490.........500.........510
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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