Job Description P25741 Confidence 98.52% Date Thu Jan 5 11:42:28 GMT 2012 Rank 264 Aligned Residues 192 % Identity 17% Template c3csvA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminoglycoside phosphotransferase; PDBTitle: crystal structure of a putative aminoglycoside phosphotransferase2 (yp_614837.1) from silicibacter sp. tm1040 at 2.15 a resolution Resolution 2.15 Å

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		34	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		T	R	R	T	L	R	F	E	L	.	S	G	K	S	Y	F	L	K	W	H	K	G	T	T	L	K	E	I	I	K	N	L	L	S	L	R	M	P	V	L	G	A	D	R	E	W	H	A	I	H	R	L	S	D	V	G	V	D	T	M	K	G	I	G	F	G	E	K	G	L	N	P	L	T	R	A	S	F	I	I
Query Conservation											.
Alig confidence											.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Sequence		T	P	R	Y	Q	R	L	R	S	P	T	G	A	K	A	V	L	X	D	W	S	P	E	E	G	G	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	P	F	V	D	L	A	Q	Y	L	R	N	L	D	I	S	A	P	E	I	Y	A	E	.	.	.	.	.	.	.	.	E	H	A	R	G	L	L
Template Known Secondary structure											T	T											T	T	T	T			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.													T	T		B								.	.	.	.	.	.	.	.		T	T	T	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50															.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.									.	.	.	.	.	.	80
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.																																																	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	E	D	L	T	P	T	I	S	L	E	D	Y	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	W	A	V	N	P	P	D	I	R	V	K	R	M	L	I	A
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	E	D	L	G	D	A	L	F	T	E	V	I	N	N	D	P	A	Q	E	X	P	L	Y	R	A	A	V	D	L	L	I	H	L	H	D	A	Q	T	P	E	L	A	R	L	D	P	E	T	L	S	E	X	T	R	L	A	F	S	E	Y	R	Y	A	I	L	G	D	A	A	E	D	N	R	K	R	F	E	H
Template Known Secondary structure								S		B									G	G	G																	T	S							B									T	T	T					T							S	S
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		R	V	A	T	M	V	R	K	M	H	T	A	.	.	G	I	N	H	R	D	C	Y	I	C	H	F	L	L	H	L	P	F	T	G	R	E	D	E	L	K	I	S	V	I	D	L	H	R	A	Q	I	R	A	K	V	P	R	R	W	R	D	K	D	L	I	G	L	Y	F	S	S	M	N	I	G	L	T	Q	R	D
Query Conservation														.	.
Alig confidence														.	.																				.	.	.																				.	.	.	.	.	.														.
Template Conservation																																			.	.	.																				.	.	.	.	.	.														.
Template Sequence		R	F	A	Q	I	L	S	A	Q	L	E	G	D	X	V	F	V	H	R	D	F	H	A	Q	N	L	L	W	L	P	E	R	E	.	.	.	G	L	A	R	V	G	V	I	D	F	Q	D	A	K	L	G	H	R	A	.	.	.	.	.	.	Y	D	L	V	S	L	L	Q	D	A	R	R	D	.	V	P	A	Q	V
Template Known Secondary structure													S							S			S	G	G	G					T	T	S		.	.	.	G	G	G	G							T	T						T	T	.	.	.	.	.	.								S		T	T	S		.
Template Predicted Secondary structure																																			.	.	.																				.	.	.	.	.	.														.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.				.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	W	R	F	M	K	V	Y	F	G	M	P	L	R	K	I	L	S	L	E	Q	N	L	L	N	M	A	S	V	K	A	E	R	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	Q	X	I	D	H	Y	I	Q	A	T	G	V	D	E	S	H	F	R	S	A	Y	A	V	I	A	V	Q	R	N	X	R	I	L
Template Known Secondary structure														T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions