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Job DescriptionP25741
Confidence97.61%DateThu Jan 5 11:42:28 GMT 2012
Rank293Aligned Residues162
% Identity20%Templatec2ig7A_
PDB info PDB header:transferaseChain: A: PDB Molecule:choline/ethanolamine kinase; PDBTitle: crystal structure of human choline kinase b
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.... .....50.........60.........70.........80.........90.......
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Query Sequence  EVFRELETRRTLRFELSG. . . . . . . . . KSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRLSDVGVDTMKGIGF
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Template Sequence  YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSL. . . . . . . . . . . . VLESVXFAILAERSL. GPQLYGV
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   72.......80.........90.........100.........110...... ...120.........130. .......
 
   98.100.........110.........120.........130.........140.........150.......
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Query Sequence  GEKGLNPLTRASFIITEDLTPTISLEDYCADWAVNPPDIRVKRMLIARVATMVRKMHTAG. . . . . . . . . . . . . . . . . . . .
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Template Sequence  FPEG. . . . . . . . . . RLEQYIPSRPLKTQELREPV. . . . . . . . . . LSAAIATKXAQFHGXEXPFTKEPHWLFGTXERYLKQ
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GGGGGS..........T


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   139140.. .......150.........160.. .......170.........180.........190........
 
   158.160.........170.........180.........190.........200....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . INHRDCYICHFLLHLPFTGREDELKISVIDLHRAQIRAKVPRRWRDK
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Template Sequence  IQDLPXNLLEXYSLKDEXGNLRKLLESTPSPVVFCHNDIQEGNILLLS. . . . . . . . . . LXLVDFEYSSYNYRGFDIGNHF
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   199200.........210.........220.........230.........240...... ...250.........260........
 
   205....210........ .220.........230.
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Query Sequence  DLIGLYFSSMNIGL. . . . . . . . . TQRDIWRFMKVYF
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Template Sequence  CEWVYDYTHEEWPFYKARPTDYPTQEQQLHFIRHYL
Template Known Secondary structure  GGGTT
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   282.......290.........300.........310.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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