Return to main results Retrieve Phyre Job Id

Job DescriptionP25741
Confidence99.91%DateThu Jan 5 11:42:28 GMT 2012
Rank6Aligned Residues185
% Identity16%Templatec1ym7C_
PDB info PDB header:transferaseChain: C: PDB Molecule:beta-adrenergic receptor kinase 1; PDBTitle: g protein-coupled receptor kinase 2 (grk2)
Resolution4.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.... .....90..
Predicted Secondary structure 



















...






Query SS confidence 




































































. . .







Query Sequence  DAFAEVKKLNGEVFRELETRRTLRFELSGKSYFLKWHKGTTLKEIIKNLLSLRMPVLGADREWHAIHRL. . . SDVGVDTM
Query Conservation 
 

 
  
 

       
   
    
     
           
             

   
  
...    
   
Alig confidence 

















...














........
























...







Template Conservation   

     

 
 

 

...      

   


 ........
 
              
      
    

 

 
Template Sequence  NDFSVHRIIGRGGFGEVY. . . GCRKADTGKMYAMKC. . . . . . . . LDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCM
Template Known Secondary structure  GG
SSS...TTT

........TTSSS

SSB

Template Predicted Secondary structure 




...




........









Template SS confidence 















































































   189190.........200...... ...210.........220. ........230.........240.........250.......
 
   93......100.........110.........120.........130.........140.........150.........160.........170..
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  KGIGFGEKGLNPLTRASFIITEDLTPTISLEDYCADWAVNPPDIRVKRMLIARVATMVRKMHTAGINHRDCYICHFLLHL
Query Conservation    
               

   
     
           
       
       
  

  

 



   


   
Alig confidence 




........






















..









































Template Conservation       ........      



   

 
   
  ..   
 
        

   
  

   







 



  
Template Sequence  SYAFH. . . . . . . . TPDKLSFILDLMNGGDLHYHLSQ. . HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE
Template Known Secondary structure  ........TT


S
B..
S

TT




GGG
T
Template Predicted Secondary structure  ........







..
















Template SS confidence 















































































   258.260.. .......270.........280..... ....290.........300.........310.........320.......
 
   173......180.........190.........200.........210......... 220.........230.
Predicted Secondary structure 


































......
Query SS confidence 














































. . . . . .











Query Sequence  PFTGREDELKISVIDLHRAQIRAKVPRRWRDKDLIGLYFSSMNIGLT. . . . . . QRDIWRFMKVYF
Query Conservation         
     

                  
  
          ......  
   
   
 
Alig confidence 











..........
























......











Template Conservation     


 


 
..........            

  
 


            
 



 


Template Sequence  HGHVRISDLGLA. . . . . . . . . . CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLF
Template Known Secondary structure  TS



TT
..........
SS






S
TTS

SSS



T
Template Predicted Secondary structure 





..........



















Template SS confidence 
































































   328.330......... 340.........350.........360.........370.........380..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions