Job Description P31134 Confidence 97.20% Date Thu Jan 5 11:47:18 GMT 2012 Rank 169 Aligned Residues 107 % Identity 25% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		Y	K	G	E	I	F	A	L	L	G	A	S	G	C	G	K	S	T	L	L	R	M	L	A	G	F	E	Q	.	P	S	A	G	Q	I	M	L	D	G	V	D	L	S	Q	V	P	P	Y	L	R	P	I	N	M	M	F	Q	S	Y	A	L	F	P	H	M	T	V	E	Q	N	I	A	F	G	L	K	Q	D	K	L
Query Conservation																														.
Alig confidence																														.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E	L	A	R	A	L	A	E	S	I	F	G	D	E	E	S	M	I	R	I	D	M	S	E	Y	M	E	K	H	S	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S		S							S		T	T	S	S														S		T	T							G	G	G	G		S	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.																															.	.
Query SS confidence																																																	.																															.	.
Query Sequence		P	K	A	E	I	A	S	R	V	N	E	M	L	G	L	V	H	M	Q	E	F	A	K	R	K	P	H	Q	L	S	G	G	Q	R	Q	R	V	A	L	A	R	S	L	A	K	R	P	.	K	L	L	L	L	D	E	P	M	G	A	L	D	K	K	L	R	D	R	M	Q	L	E	V	V	D	I	L	E	R	.	.
Query Conservation																																																	.																															.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.												.	.	.	.	.															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	T	E	K	V	R	R	K	P	Y	S	V	V	L	L	D	A	I	E	K	A	.	.	.	.	.	H	P	D	V	F	N	I	L	L	Q	V	L	E	D	G	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									S	S	S							G	G	G	S	.	.	.	.	.															S	B
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
																																								602	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.						.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.
								199	200	.	.	.	.	.	.	.	.																		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	V	G	V	T	C	V	M	V	T	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Q	E	E	A	M	T	M	A	G	R	I	A	I	M	N
Query Conservation		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.
Template Conservation																																										.
Template Sequence		L	T	T	V	D	F	R	N	T	I	L	I	M	T	S	N	V	G	A	S	E	K	D	K	V	M	G	E	L	K	R	A	F	R	P	E	F	I	N	R	.	I	D	E	I	I	V	F	H
Template Known Secondary structure						B		T	T								S	S	S	T	T													S						T	T	.	S	S
Template Predicted Secondary structure																																										.
Template SS confidence
		639	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.		.	680	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions