Job Description P31134 Confidence 100.00% Date Thu Jan 5 11:47:18 GMT 2012 Rank 9 Aligned Residues 349 % Identity 23% Template c3gd7C_ PDB info PDB header:hydrolase Chain: C: PDB Molecule:fusion complex of cystic fibrosis transmembrane PDBTitle: crystal structure of human nbd2 complexed with n6-2 phenylethyl-atp (p-atp) Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.			90
Predicted Secondary structure																	.	.																																																													.	.
Query SS confidence																	.	.																																																													.	.
Query Sequence		A	L	T	P	L	L	E	I	R	N	L	T	K	S	Y	.	.	D	G	Q	H	A	V	D	D	V	S	L	T	I	Y	K	G	E	I	F	A	L	L	G	A	S	G	C	G	K	S	T	L	L	R	M	L	A	G	F	E	Q	P	S	A	G	Q	I	M	L	D	G	V	D	L	S	Q	V	P	P	Y	.	.	L
Query Conservation																	.	.																																																													.	.
Alig confidence																	.	.																																									.																				.	.
Template Conservation																																																											.
Template Sequence		P	S	G	G	Q	M	T	V	K	D	L	T	A	K	Y	T	E	G	G	N	A	I	L	E	N	I	S	F	S	I	S	P	G	Q	R	V	G	L	L	G	R	T	G	S	G	K	S	T	L	L	S	A	F	L	R	L	L	.	N	T	E	G	E	I	Q	I	D	G	V	S	W	D	S	I	T	L	E	Q	W	R
Template Known Secondary structure				S												S	S	T	T	S													T	T									T	T	S	S									T	T		S	.									T	T			S	S	S	S						G
Template Predicted Secondary structure																																																											.
Template SS confidence
		1205	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.		.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		R	P	I	N	M	M	F	Q	S	Y	A	L	F	P	H	M	T	V	E	Q	N	I	A	F	G	L	K	Q	D	K	L	P	K	A	E	.	.	.	.	I	A	S	R	V	N	E	M	L	G	L	V	H	M	Q	E	F	A	K	R	K	P	H	Q	L	S	G	G	Q	R	Q	R	V	A	L	A	R	S	L	A	K
Query Conservation																																					.	.	.	.
Alig confidence																	.																				.	.	.	.
Template Conservation																	.
Template Sequence		K	A	F	G	V	I	P	Q	K	V	F	I	F	S	G	.	T	F	R	K	N	L	D	P	N	A	A	H	S	D	Q	E	I	W	K	V	A	D	E	V	G	L	R	S	V	I	E	Q	F	P	G	K	L	D	F	V	L	V	D	G	G	C	V	L	S	H	G	H	K	Q	L	M	C	L	A	R	S	V	L	S
Template Known Secondary structure		G	G					S							S	S	.	B							T	T	S		S										T	T	T	T		T	T	T	G	G	G	S	T	T	G	G	G		B			T	T	T	T	T	S																T
Template Predicted Secondary structure																	.
Template SS confidence
		1284	.	.	.	.	.	1290	.	.	.	.	.	.	.	.		.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	K	L	L	L	L	D	E	P	M	G	A	L	D	K	K	L	R	D	R	M	Q	L	E	V	V	D	I	L	E	R	V	G	V	T	C	V	M	V	T	H	D	Q	E	E	A	M	T	M	A	G	R	I	A	I	M	N	R	G	K	F	V	Q	I	G	E	P	E	E	I	Y	E	H	P	T	T	R	Y	S
Query Conservation
Alig confidence																													.	.	.
Template Conservation																													.	.	.
Template Sequence		K	A	K	I	L	L	L	D	E	P	S	A	H	L	D	P	V	T	Y	Q	I	I	R	R	T	L	K	.	.	.	Q	A	F	A	D	C	T	V	I	L	C	E	A	R	I	E	A	M	L	E	C	D	Q	F	L	V	I	E	E	N	K	V	R	Q	Y	D	S	I	L	E	L	Y	H	Y	P	A	D	R	F	V
Template Known Secondary structure		T								S					S														.	.	.		T	T	T	T	S							S	S	G	G	G	S	T	T		S							S	S						S										S	B
Template Predicted Secondary structure																													.	.	.
Template SS confidence
		1363	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.				1390	.	.	.	.	.	.	.	.	.	1400	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.
		247	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure									.	.																							.	.
Query SS confidence									.	.																							.	.
Query Sequence		A	E	F	I	G	S	V	.	.	N	V	F	E	G	V	L	K	E	R	Q	E	D	G	L	V	L	D	S	P	G	L	.	.	V	H	P	L	K	V	D	A	D	A	S	V	V	D	N	V	P	V	H	V	A	L	R	P	E	K	I	M	L	C	E	E	P	P	A	N	G	C	N	F	A	V	G	E	V	I	H
Query Conservation									.	.																							.	.
Alig confidence									.	.																							.	.																															.	.	.	.
Template Conservation																																																																	.	.	.	.
Template Sequence		A	G	F	I	G	S	P	K	M	N	F	L	P	V	K	V	T	A	T	A	I	D	Q	V	Q	V	E	L	P	M	P	N	R	Q	Q	V	W	L	P	V	E	S	R	D	V	Q	V	G	A	N	M	S	L	G	I	R	P	E	H	L	L	P	S	.	.	.	.	D	I	A	D	V	I	L	E	G	E	V	Q	V
Template Known Secondary structure			T	T	S	S	S	S														T	T							S	S	T	T							S	B			T	T			T	T									T	T	T				G	.	.	.	.	G	G		S	S
Template Predicted Secondary structure																																																																	.	.	.	.
Template SS confidence
		1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.					.	.	.	.	.	.	.	1510	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	Y	L	G	D	L	S	V	Y	H	V	R	L	K	S	G	Q	M	I	S	A	Q	L	Q	N	A	H	R	H	R	K	G	L	P	T	W	G	D	E	V	R	L	C	W	E	V	D	S	C	V	V	L	T
Query Conservation
Alig confidence																																.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		V	E	Q	L	G	N	E	T	Q	I	H	I	Q	I	P	S	I	R	Q	N	L	V	Y	R	Q	N	D	V	V	L	.	.	.	.	V	E	E	G	A	T	F	A	I	G	L	P	P	E	R	C	H	L	F	R
Template Known Secondary structure						S	S									T	T		S	S								S				.	.	.	.			T	T									G	G	G
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		1516	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540	.	.	.	.	.					.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions