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Job DescriptionP31134
Confidence97.78%DateThu Jan 5 11:47:18 GMT 2012
Rank126Aligned Residues148
% Identity16%Templatec2zroA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protein reca; PDBTitle: msreca adp form iv
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   42.......50.........60.........70.........80.........90.........100.........110.........120.
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Query Sequence  IYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSYALFPHMTVEQNIAFGLKQDKL
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Template Sequence  LPRGRVIEIYGPESSGKTTVALHAVANAQAAGGIAAFIDAEHALDPEYAKKLG. . . . . . . . . . . . . . . VDTDSLLVSQPD
Template Known Secondary structure  TTSTTSSTT


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   58.60.........70.........80.........90.........100.........110 .........120..
 
   122.......130.........140.........150.........160.........170.........180 .....
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Query Sequence  PKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL. . . . . . . . . . . . . . . . DKKLR
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Template Sequence  TGEQALEIADMLVRS. . . . . . . . . . . . . . . . . . . . . . . . . . . . . GALDIIVIDSVAALVPRAEIEGEMGDSHVGLQARLM
Template Known Secondary structure  STT.............................S

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   123......130....... ..140.........150.........160.........170...
 
   186...190.........200.........210... ......220.........230...
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Query Sequence  DRMQLEVVDILERVGVTCVMVTHDQEEA. . . . . . . . . . MTMAGRIAIMNRGKFVQIGE
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Template Sequence  SQALRKMTGALNNSGTTAIFINQLREKIGETTTGGKALKFYASVRLDVRRIETLKDGT
Template Known Secondary structure  T

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   174.....180.........190.........200.........210.........220.........230.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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