Job Description P31134 Confidence 96.89% Date Thu Jan 5 11:47:18 GMT 2012 Rank 211 Aligned Residues 149 % Identity 20% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	G	E	I	F	A	L	L	G	A	S	G	C	G	K	S	T	L	L	R	M	L	A	G	F	E	Q	P	S	A	G	Q	I	M	L	D	G	V	D	L	S	Q	V	P	P	Y	L	R	P	I	N	M	M	F	Q	S	Y	A	L	F	P	H	M	T	V	E	Q	N	I	A	F	G	L	K	Q	D	K	L	P
Query Conservation
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	D	R	N	L	W	F	L	V	G	L	Q	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	.	.	.	.	.	.	.	.	.	.	.	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S
Template Known Secondary structure			S	S								S	T	T	S	S														T	T	T											S	S	T	T	.	.	.	.	.	.	.	.	.	.	.													T								T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140												.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.		.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																												.					.
Query SS confidence																																												.					.
Query Sequence		K	A	E	I	A	S	R	V	N	E	M	L	G	L	V	H	M	Q	E	F	A	K	R	K	P	H	Q	L	S	G	G	Q	R	Q	R	V	A	L	A	R	S	L	.	A	K	R	P	.	K	L	L	L	L	D	E	P	M	G	A	L	D	K	K	L	R	D	R	M	Q	L	E	V	V	D	I	L	E	R	V	G
Query Conservation																																												.					.
Alig confidence																																												.					.															.	.	.	.	.	.
Template Conservation																																																																.	.	.	.	.	.
Template Sequence		P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G	R	L	Q	I	D	E	P	L	M	G	E	L	A	R	L	K	E	V	L	G	P	D	E	V	L	L	V	L	D	A	M	T	G	Q	E	A	.	.	.	.	.	.	L	S	V	A	R	A	F	D	E	K	V	G
Template Known Secondary structure																T	T													T	T																		S								T	T			T	T		.	.	.	.	.	.											T
Template Predicted Secondary structure																																																																.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.							.	.	.	230	.	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	C	V	M	V	T	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	T	G	L	V	L	T	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions