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Job DescriptionP31134
Confidence100.00%DateThu Jan 5 11:47:18 GMT 2012
Rank51Aligned Residues214
% Identity27%Templatec2ghiD_
PDB info PDB header:transport proteinChain: D: PDB Molecule:transport protein; PDBTitle: crystal structure of plasmodium yoelii multidrug resistance2 protein 2
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   13......20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  RKALTPLLEIRNLTKSYDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPSAGQIMLDGVDLSQVPPYL. .
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Template Sequence  EKKFGVNIEFSDVNFSYHR. . TLKSINFFIPSGTTCALVGHTGSGKSTIAKLLYRFYDAE. GDIKIGGKNVNKYNRNSIR
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   11........20......... 30.........40.........50.........60........ .70.........80.......
 
   91........100.........110.........120.........130.........140......... 150.........160.....
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Query Sequence  RPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQ. . . . . LSGGQRQRVALARSLA
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Template Sequence  SIIGIVPQDTILFNE. TIKYNILYG. . . . . . KLDATDEEVIKATKSAQLYDFIEALPKKWDTIVLSGGERQRIAIARCLL
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   93......100....... ..110...... ...120.........130.........140.........150.........160.....
 
   166...170.........180.........190.........200.........210.........220.........230.........240.....
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Query Sequence  KRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPTTRY
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Template Sequence  KDPKIVIFDDSKTEYL. . . . . . . . . . FQKA. VEDNRTLIIIAHRLSTI. SSAESIILLNKGKIVEKGTHKDLLKL. . NGE
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   172.......180....... ..190. ........200........ .210.........220.........230.... ...
 
   246...250
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Query Sequence  SAEFI
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Template Sequence  YAEMW
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   247..250.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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