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Job DescriptionP31134
Confidence98.07%DateThu Jan 5 11:47:18 GMT 2012
Rank109Aligned Residues120
% Identity18%Templatec1wbdA_
PDB info PDB header:dna-bindingChain: A: PDB Molecule:dna mismatch repair protein muts; PDBTitle: crystal structure of e. coli dna mismatch repair enzyme2 muts, e38q mutant, in complex with a g.t mismatch
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  DGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAG. . . . . . . . . FEQPSAGQIMLDGVDLSQVPPYLRPINMMFQSY
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Template Sequence  NEPFIANPLNL. SPQRRMLIITGPNMGGKSTYMRQTALIALMAYIGSYVPAQKVEIGPIDRIFTRVG. . . . . . . . . . . . .
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   593......600... ......610.........620.........630.........640.........650........
 
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Query Sequence  ALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKPHQLSGGQRQRVALARSLAKRPKLLLLDEPMGAL
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FMVEMTETANILHN. ATEYSLVLMDEIGRGT
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   670.........680... ......690.........
 
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Query Sequence  DKKLRDRMQLEVVDILERV. GVTCVMVTHDQEEA
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Template Sequence  STYDGLSLAWACAENLANKIKALTLFATHYFELT
Template Known Secondary structure  STTTT


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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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