Job Description P31134 Confidence 100.00% Date Thu Jan 5 11:47:18 GMT 2012 Rank 8 Aligned Residues 338 % Identity 35% Template c1oxtB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:abc transporter, atp binding protein; PDBTitle: crystal structure of glcv, the abc-atpase of the glucose abc2 transporter from sulfolobus solfataricus Resolution 2.10 Å

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		20	.	.	.	.	.	.	.	.	.			30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.						.	.	.	.	90	.	.
Predicted Secondary structure												.	.																																																									.	.	.	.	.
Query SS confidence												.	.																																																									.	.	.	.	.
Query Sequence		L	E	I	R	N	L	T	K	S	Y	.	.	D	G	Q	H	A	V	D	D	V	S	L	T	I	Y	K	G	E	I	F	A	L	L	G	A	S	G	C	G	K	S	T	L	L	R	M	L	A	G	F	E	Q	P	S	A	G	Q	I	M	L	D	G	V	D	L	S	Q	.	.	.	.	.	V	P	P	Y	L	R	P
Query Conservation												.	.																																																									.	.	.	.	.
Alig confidence												.	.																																																									.	.	.	.	.
Template Conservation
Template Sequence		I	I	V	K	N	V	S	K	V	F	K	K	G	K	V	V	A	L	D	N	V	N	I	N	I	E	N	G	E	R	F	G	I	L	G	P	S	G	A	G	K	T	T	F	M	R	I	I	A	G	L	D	V	P	S	T	G	E	L	Y	F	D	D	R	L	V	A	S	N	G	K	L	I	V	P	P	E	D	R	K
Template Known Secondary structure												G	G	G	T													T	T									T	T	S	S										T	S	S			S							T	T						T	T			S	S		G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	M	M	F	Q	S	Y	A	L	F	P	H	M	T	V	E	Q	N	I	A	F	G	L	K	Q	D	K	L	P	K	A	E	I	A	S	R	V	N	E	M	L	G	L	V	H	M	Q	E	F	A	K	R	K	P	H	Q	L	S	G	G	Q	R	Q	R	V	A	L	A	R	S	L	A	K	R	P	K	L	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	M	V	F	Q	T	W	A	L	Y	P	N	L	T	A	F	E	N	I	A	F	P	L	T	N	M	K	M	S	K	E	E	I	R	K	R	V	E	E	V	A	K	I	L	D	I	H	H	V	L	N	H	F	P	R	E	L	S	G	G	Q	Q	Q	R	V	A	L	A	R	A	L	V	K	D	P	S	L	L	L
Template Known Secondary structure							T	T					T	T	S								G	G	G	T	T	S	S																	T	T		G	G	G	T	T	S		G	G	G	S															T	T			S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	E	P	M	G	A	L	D	K	K	L	R	D	R	M	Q	L	E	V	V	D	I	L	E	R	V	G	V	T	C	V	M	V	T	H	D	Q	E	E	A	M	T	M	A	G	R	I	A	I	M	N	R	G	K	F	V	Q	I	G	E	P	E	E	I	Y	E	H	P	T	T	R	Y	S	A	E	F	I	G	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	D	E	P	F	S	N	L	D	A	R	M	R	D	S	A	R	A	L	V	K	E	V	Q	S	R	L	G	V	T	L	L	V	V	S	H	D	P	A	D	I	F	A	I	A	D	R	V	G	V	L	V	K	G	K	L	V	Q	V	G	K	P	E	D	L	Y	D	N	P	V	S	I	Q	V	A	S	L	I	G	E
Template Known Secondary structure				S	S	S	S	S	S																												S										S							T	T														S		S	S								S
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.			.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
Predicted Secondary structure																																																										.	.
Query SS confidence																																																										.	.
Query Sequence		V	N	V	F	E	G	V	L	K	E	R	Q	E	D	G	L	V	L	D	S	P	G	L	V	H	P	L	K	V	D	A	D	A	S	V	V	D	N	V	P	V	H	V	A	L	R	P	E	K	I	M	L	C	E	E	P	.	.	P	A	N	G	C	N	F	A	V	G	E	V	I	H	I	A	Y	L	G	D	L	S
Query Conservation																																																										.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.																																.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	N	E	L	E	G	K	V	T	N	E	G	V	.	.	.	.	.	.	.	.	.	.	.	.	V	I	G	S	L	R	F	P	V	S	V	S	S	D	R	A	I	I	G	I	R	P	E	D	V	K	L	S	K	D	V	I	K	D	D	S	W	I	L	V	G	K	G	K	V	K	V	I	G	Y	Q	G	G	L	F
Template Known Secondary structure											S	S	S		.	.	.	.	.	.	.	.	.	.	.	.			T	T				S				S	S	S								G	G	G					S	S					T	T																T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.													.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Y	H	V	R	L	K	S	G	Q	M	I	S	A	Q	L	Q	N	A	H	R	H	R	K	G	L	P	T	W	G	D	E	V	R	L	C	W	E	V	D	S	C	V	V	L
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		R	I	T	I	T	P	L	D	S	E	E	E	I	F	T	Y	S	D	H	P	.	.	.	.	.	.	I	H	S	G	E	E	V	L	V	Y	V	R	K	D	K	I	K	V	F
Template Known Secondary structure								T	T										S	S		.	.	.	.	.	.			T	T									G	G	G
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.							.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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