Return to main results Retrieve Phyre Job Id

Job DescriptionP31061
Confidence65.18%DateThu Jan 5 11:46:57 GMT 2012
Rank175Aligned Residues34
% Identity35%Templated2d1ha1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain TrmB-like
Resolution2.05

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20. ........30.....
Predicted Secondary structure 





....










Query SS confidence 



















. . . .













Query Sequence  EVNKKQLADIFGASIRTIQN. . . . WQEQGMPVLRGGGK
Query Conservation   


 


 




 


  ....
   
 

   
  
Alig confidence 



















....













Template Conservation       


  
 

 



  
  
   


   
 
 
Template Sequence  PITSEELADIFKLSKTTVENSLKKLIELGLVVRTKTPK
Template Known Secondary structure 
T

TTS


Template Predicted Secondary structure 










Template SS confidence 





































   36...40.........50.........60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions